Sediminispirochaeta smaragdinae: Spirs_3513
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Entry
Spirs_3513 CDS
T01287
Name
(GenBank) ABC transporter related protein
KO
K14698
ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_3513
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_3513
Transporters [BR:
ssm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Spirs_3513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
DEAD
Halogen_Hydrol
AAA
AAA_25
AAA_18
AAA_22
AAA_30
Innexin
AAA_29
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ADK82601
UniProt:
E1R796
LinkDB
All DBs
Position
complement(3780172..3781971)
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AA seq
599 aa
AA seq
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MPEKKKEFVLQRFLPYMGKKKALLPLALVLSGISAILNILPFVLVWYITRNILSNPSAID
MTRVGFYAWVAFACALGGVVFYFCALMSSHLAAFRVEVGMQKIGMQKILSMPLGFFDKHS
SGKIRKIVNDGAGTTHTFLAHQLPDMAGSIISPIILLVLLFVVDWRMGLASLFPIILGFI
TMKFMMSSQGKTFQKKYFDSLEEMSSESVEYIRGIPVVKTFGQSIFSFKRFHDSIIRYKE
MVHAYTLLWRRPMSFYTAIMESAGFFLIPIAILLIGRGAEIPLVLADFVFYMLISPIFTL
LLMRSMYFQQNAMIAEQAIDRLDKLLQYPGLGYSEITKEIMNHRLEFKDVVFSYEGSDQP
ALDGVSFTLHEGETIALVGASGGGKTTIARLAARFWDVDEGEILVGGINVKDIPRKELMD
TISFVFQTTRLFKGPLRENIVFGKKNVDDDTISQAIDSSQSREIIDKLPDGLDTVIGSKG
TYLSGGEQQRIALARAIVKDAPIVLLDEATAFADPENEHLIQKALKELSRGKTTLMIAHR
LTTVQHVDRILVIERGRIAEEGTHQQLLDNGGIYKTMWDEYQRSVAWKIAAKETVGIGE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaagaaaaaagaatttgtcttacagcggtttttaccttatatgggtaaaaag
aaagcgcttttgcctttggctttggtattatcgggaatttccgcaatactcaatatcctg
ccttttgtgctggtatggtacataacacgcaatatcctctcaaacccttcggcgattgac
atgacccgtgttggcttctatgcatgggtagcgtttgcctgtgccttgggcggtgttgtc
ttttacttctgtgcgcttatgagctcccaccttgctgcctttcgggtggaggtaggtatg
cagaagatcggcatgcaaaagatcctgtcgatgccgctgggctttttcgataagcactcc
agcggaaaaatccgaaagatcgtaaacgacggggccggtacgacacacacctttttggcg
catcagcttccggatatggcgggcagtatcatctctcccataatccttttggtgctgctg
tttgtcgtggactggaggatggggcttgcgtccctttttcccattatcctgggattcatc
accatgaaattcatgatgagctctcagggaaaaacgttccaaaagaagtatttcgattct
ctggaggagatgagctcggaatccgtggaatatatccgcggtattccggttgtgaaaacc
ttcggacaaagtattttttcatttaagcgttttcacgacagcattatccgatataaggag
atggtgcatgcctatacactgctctggcgaaggcccatgtcgttttataccgcgattatg
gaatccgccggcttctttttaattcccattgcaatcctattaatcggaaggggagccgag
atccctctcgtgctggccgatttcgtcttttacatgttgatttctcctatctttaccctg
cttttgatgcgttccatgtattttcagcagaatgcaatgatcgcggaacaagccatcgac
agactggataagcttttacagtatccgggccttgggtatagcgaaatcacaaaagaaatt
atgaatcaccgcctggaattcaaggatgttgtattttcctacgaaggcagtgatcagccc
gcccttgatggtgtcagctttacgttacacgaaggcgaaacaattgctttagtcggcgca
tcgggaggaggcaaaacaaccattgcccggctggctgcgcgtttctgggatgtggatgag
ggggaaattctggtcggagggataaatgtcaaggatatccccaggaaagaactgatggat
acgatctcctttgtttttcaaaccacgcgactgtttaaaggtcctttacgggaaaatatc
gtttttggaaagaagaatgttgatgacgataccatttcccaggccatcgattcctcacag
tcgagggaaataattgacaaacttccggatggactggacacggtaatcggttccaaagga
acctatctatcgggcggagaacagcagcggatcgcccttgccagagccatagtcaaagat
gcccccatcgtgcttttggatgaagccactgcttttgcagatccggaaaacgagcacctc
atccagaaggctctgaaagagcttagccggggaaagacgacactgatgattgcccatcgg
cttaccaccgtacaacatgtcgaccggattctggtgattgagcgcggaaggatcgcggag
gaaggcactcaccaacagctgctggataacggcgggatctataagaccatgtgggatgaa
tatcaaaggtccgttgcctggaaaatcgcggccaaagagactgtgggtataggagaataa
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