Sediminispirochaeta smaragdinae: Spirs_3517
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Entry
Spirs_3517 CDS
T01287
Name
(GenBank) transcriptional regulator, LysR family
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssm03000
]
Spirs_3517
03036 Chromosome and associated proteins [BR:
ssm03036
]
Spirs_3517
Transcription factors [BR:
ssm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Spirs_3517
Chromosome and associated proteins [BR:
ssm03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
Spirs_3517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_AsnC-type
HTH_50
P22_Cro
HTH_24
I-HmuI_NUMOD-like
Motif
Other DBs
NCBI-ProteinID:
ADK82605
UniProt:
E1R7A0
LinkDB
All DBs
Position
complement(3784262..3785149)
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AA seq
295 aa
AA seq
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MFDYRQIEAFGAVIEYGGFDRAADALGLTQSAVTQRVKHLESYVGEPLLVRSNPPVPTKA
GIPLYSHFKKIRLLEEDLERGTETRLSGTALSLGVGASTLGSWFLPVLRLIMKFTLVDLH
VGEAKVVHRLLQLGNLAGCISLRSQPSRGCSVTYLGNLVLRCVATKEFKKYFFPLGITAE
SMTAAPAILFHPESQMMRMYQKKVLKIAPFDVPSHIIPSQSEYLHMISSGVAYGFLPDPL
FRQVQADHRLIDLSPLAPIIIPQYWHRWGIDSELLEHVTLKIQEAAQASLLRDQT
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatcgacaaatcgaagcctttggggcggttatcgaatacggcggctttgac
agggcggctgatgccctcggcttgacgcaatcggcggtcacgcagcgggtgaaacatctg
gagtcctatgtgggagagcctttactggttcgttcgaatccgccggttccaaccaaagcg
ggaatccctttatacagccattttaaaaaaatacggctgctggaagaggacctggagcgg
ggcacggaaacaaggctttcgggaacggccttatccctgggagtgggcgcttctacgctt
ggcagttggtttcttcctgtgctgcgcctgattatgaaattcacgctggtcgatctgcat
gtcggcgaagcaaaggttgttcatcgtcttcttcagttgggaaatctggcaggttgtatc
tcgcttcgaagtcagccttccaggggctgttccgttacctatcttggcaatctcgttctc
cggtgtgttgctacgaaggagtttaaaaagtatttttttcctctagggataacagcggaa
tccatgaccgctgcgccggcgatcctgttccatcctgaaagccagatgatgcgaatgtat
caaaagaaagtgttaaagattgccccttttgatgtaccttcccatattattccctcgcag
agtgaatatctgcatatgatcagcagtggagttgcctatggatttctgcctgatcccctt
tttcggcaggttcaggccgatcaccgacttatcgatctgtcgcccctggctccaattatc
attccccagtactggcaccgatggggtatcgattcggaattgctggaacatgtcaccctg
aaaatacaggaagcggcacaggccagtctacttcgggatcaaacgtaa
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