Sediminispirochaeta smaragdinae: Spirs_3546
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Entry
Spirs_3546 CDS
T01287
Name
(GenBank) transcriptional regulator, DeoR family
KO
K05346
deoxyribonucleoside regulator
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssm03000
]
Spirs_3546
Transcription factors [BR:
ssm03000
]
Prokaryotic type
Other transcription factors
Others
Spirs_3546
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sugar-bind
Sigma70_r4
Sigma70_r4_2
HTH_23
MarR_2
HTH_Crp_2
DUF7343
TrmB
Sigma70_r3
TetR_N
PCI
MarR
Phage_antitermQ
HTH_36
Motif
Other DBs
NCBI-ProteinID:
ADK82634
UniProt:
E1R7C9
LinkDB
All DBs
Position
3818201..3819184
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AA seq
327 aa
AA seq
DB search
MRSQESIYQEALQVATLYYYHGLTTEAIAKEMNFSRPKVSRLLSHARQSGMVEIRIVNVE
NKLLPLEQSIKDHFGLENVHIVPVPKLLGEMVWLEYVAQYAANYLNEILEPGCTLAVAWG
TTISEIAVHLIPKRMPGITIVQMNGSGNTYTPDNRYAANILQKFSENYEASYLLFPVPTF
FDYRETKEALFRERSIKKIIETQNNADILLYSVGAVDAGVPSHIYSSGYLEPEDIQSLEE
QGVVGDLATVFFRENGTYKDIPINQRASGPSLELYKKAPRAICVVSGRAKIHGLHAALRA
GYVKELIVDEPTAHLLWQRMGHSLDDL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagatcccaggaaagcatttatcaggaagccttacaggtagctacattatactattat
cacggcctgaccaccgaggctattgccaaggaaatgaatttttcccgaccgaaggtatcg
cggttgctcagccatgcccgtcaaagcggcatggttgaaattcgcattgtaaatgtggaa
aacaagctgcttcctctcgaacagagtattaaagatcacttcgggcttgaaaatgtccac
atcgttcccgttcccaagctgcttggcgagatggtctggcttgagtatgtggcgcaatat
gcagccaactatctgaatgaaatcctcgaaccgggctgtaccctcgccgtcgcctgggga
accaccatcagcgaaatcgcggtacatcttattcccaagcgaatgccgggcattaccatc
gttcagatgaacggttcgggtaatacctatacccccgacaaccgctatgccgcaaacatt
cttcagaaattttccgaaaactacgaagcgagttatcttctttttcccgttcccacattc
ttcgactacagagaaacgaaggaagcccttttcagggaacgaagtatcaagaaaatcatt
gaaacacagaacaatgccgatatactcctctacagtgtaggggccgtggatgccggagtt
cccagtcacatctactccagcggttatctcgaaccggaagacatccagtccctggaagaa
cagggggtggtgggagaccttgcaacggttttcttccgtgaaaatggtacctacaaagac
atccccatcaaccaacgggcaagcggcccatcccttgaactctacaaaaaggcccctcgc
gccatttgcgtggtgtcaggacgggccaaaatccatggtctgcacgcagcactccgggct
ggatatgtgaaagagcttattgtggacgagccgaccgctcatctcttatggcagcggatg
ggtcacagcctggacgatctatag
DBGET
integrated database retrieval system
