Sediminispirochaeta smaragdinae: Spirs_3572
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Entry
Spirs_3572 CDS
T01287
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00730
Thiamine metabolism
ssm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Spirs_3572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssm03009
]
Spirs_3572
Enzymes [BR:
ssm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
Spirs_3572
Ribosome biogenesis [BR:
ssm03009
]
Prokaryotic type
GTPases
Spirs_3572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
AAA_29
AIG1
Dynamin_N
AAA_22
cobW
Septin
AAA_18
MeaB
APS_kinase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ADK82660
UniProt:
E1R7F5
LinkDB
All DBs
Position
complement(3844127..3845218)
Genome browser
AA seq
363 aa
AA seq
DB search
MHYSDNIHLLEQYGWNSRFAENFEPYRCQGLIPARVVRDGRERYRGIHPGGEAALTLSGS
FRYLLDLGVQPMPVIGDWCALSSTDDPAHFRIEGILPRATVLHRRSCGDEDLSAANVDVI
GIVSSIAKGLNLRRIERFLANVQSGGAQGALILTKIDLVDEPEAYKRRAAARFGELPIYL
VDSISGTGAGELSDLFLPGRTIALTGISGAGKSTLINLLLGSSMARTSAVRDSDGRGRHT
TTERVLFRIPSGALVIDTPGVRSVGITGSEASTEASFDDIARLAEACRFSDCTHRNEPGC
AVRKALLAGEIEQDRYLNYLQLLHEASAGEVDERERRREKDRRFGRLRYTMRKEGRRGGF
DGR
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
ttgcattattccgacaatatacatcttctcgagcaatatggctggaatagccgttttgcc
gaaaatttcgaaccctatcgatgtcagggattgatacctgccagagtcgtccgtgacggc
agagagcgctatcggggaatccatcccggtggtgaagcagcgttgaccctttccgggagc
ttccgctacctccttgatctcggagtacagcctatgccggtgataggagactggtgtgcc
ctctcttccaccgacgatcccgctcattttcgcattgagggaatcctgccccgtgccacg
gttctgcatcgccgcagctgcggcgacgaggatctgagcgcggcaaacgttgatgtgata
ggaatcgtttcttccatcgcgaaaggcctcaaccttcgtcggatcgagcgtttccttgcc
aatgttcaaagcgggggggcacagggcgccctgattcttacaaagatcgatcttgtcgat
gagcctgaggcctacaaaagaagggctgccgctcgtttcggagagcttcccatctacctt
gtggactcgatttccggaacgggggccggagagcttagcgatctttttcttcctggaaga
actatcgccctgaccggcatcagcggagcgggaaaatccacccttatcaatctccttctc
ggaagctcgatggcaaggacctcagcggttcgcgacagtgacggacggggaaggcacacc
accacggaacgggtactcttccgcattccttccggtgctttggtcatcgatacgccgggg
gtccgatcggtaggtattaccggcagcgaggcatcgacagaggcttcctttgatgatatt
gcacgtttggccgaagcgtgtcgtttttcggactgcacccatcgcaatgaaccgggctgc
gcggtaagaaaagcgcttttagccggagagatcgaacaggatcgttatctcaactatctg
cagcttttgcatgaggcctcggccggagaagtcgatgagcgtgaaaggcggcgggagaag
gaccggcgcttcggcaggcttcgctataccatgcggaaagagggacggaggggaggcttc
gatggccgctga
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