Sediminispirochaeta smaragdinae: Spirs_3624
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Entry
Spirs_3624 CDS
T01287
Name
(GenBank) ABC-type ribose transport system, periplasmic component
KO
K10543
D-xylose transport system substrate-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_3624
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_3624
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
Spirs_3624
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
ADK82710
UniProt:
E1R7K5
LinkDB
All DBs
Position
complement(3902993..3904057)
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AA seq
354 aa
AA seq
DB search
MKKMLSSVMALVLFLVPFFVSAEGSQESTAESKSKEEVVIGFSFPTLREERWAAEKEIAI
AYAKQQGVKLIVQDADTDANVQNQQIDNLITQDVDCLIIGPQDVNAMSSSLDAAKEAGIP
VISYLRLIDNKGLTMFVGYDFTMIGEDMAKSATNSVPEGNYVVIAGDSGDNVSYQLRDGF
YNVIQPKINSGDISVVYEQYIDTWSPENAMSNMENALTNEHNNIQAVLVENDTMAGACIQ
ALKAQGLDGKVFVTGMDGDVAALQRIAEGSQSMTMLFEHDFIAKAAVDAAIDLAMGVDHQ
AVNGTVEAGGESVPAVLLSASKITSDTLYDIVIGKKLQKMEDVYKNVPKNRWPK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaatgttatcaagtgtaatggcattagttttattcttagtcccgttcttcgtt
agcgcagaaggttcgcaggaaagtacggcggagagtaagagcaaggaagaggttgtcatc
ggattctcttttcctacattgcgtgaggagcgttgggctgctgaaaaggaaattgctatt
gcatatgcaaagcaacaaggtgtgaagcttattgtccaggatgccgataccgatgcaaat
gtacagaatcaacaaatagataatctgattacccaggatgtggattgcctcattatcggt
cctcaggatgttaatgcaatgtcttcgagtctggatgccgcaaaggaagccggtattccg
gtgatttcgtatctgcggctcattgataataaaggactcacaatgtttgtgggatacgat
tttaccatgataggcgaagatatggcgaaaagtgcaactaatagtgtaccagaaggtaac
tacgtcgtgattgcaggagactcgggagataatgtctcctatcagctgcgggatggtttc
tacaatgtcattcagccgaagattaacagcggtgatatcagtgtggtgtatgagcagtac
atcgatacctggtcgccggagaacgccatgtcgaatatggaaaacgcacttaccaatgaa
cataacaacattcaggctgtattagttgaaaacgacaccatggcaggagcctgcatacag
gcactaaaggcacagggccttgatggaaaggtttttgtaacaggaatggatggcgatgtg
gctgctctccagaggattgccgaaggaagtcaaagcatgactatgcttttcgaacatgat
tttattgcgaaagctgccgtcgatgcggcgatagatcttgcaatgggtgtggaccatcag
gctgttaatggaaccgttgaggccggtggtgagtcggttcctgctgttcttctgtctgcc
agtaagataacttctgatactttgtacgatatcgtgatcgggaaaaaactgcaaaagatg
gaagatgtatacaaaaacgttccgaaaaatcggtggcctaagtag
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