Sediminispirochaeta smaragdinae: Spirs_3676
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Entry
Spirs_3676 CDS
T01287
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm03030
DNA replication
ssm03410
Base excision repair
ssm03420
Nucleotide excision repair
ssm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spirs_3676
03410 Base excision repair
Spirs_3676
03420 Nucleotide excision repair
Spirs_3676
03440 Homologous recombination
Spirs_3676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssm03032
]
Spirs_3676
03400 DNA repair and recombination proteins [BR:
ssm03400
]
Spirs_3676
Enzymes [BR:
ssm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spirs_3676
DNA replication proteins [BR:
ssm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Spirs_3676
DNA repair and recombination proteins [BR:
ssm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Spirs_3676
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spirs_3676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADK82762
UniProt:
E1R7Q7
LinkDB
All DBs
Position
complement(3962588..3965323)
Genome browser
AA seq
911 aa
AA seq
DB search
MKRSEETTTLYLLDGYSIIYRSYFAFMGRHLSAPDGTNVSALFGFFRTLFSILDEYRPGA
LAVVLDSRVPTFRHEMYPEYKANREKAPEELHAQVPMIEEILGVMGMTVLRKDGVEADDI
IATMAERCRKKDRPCVIVTGDKDLLQLLGGEIRMLRPEKGGYQLIGRDDVFDQWGVEADQ
IVDYLSLTGDQADNVPGVKGIGPKTASKLLTKFGDLDGVYANLNACSTGERAKLEASRED
AFLSRSLIILKKDVSLPPEAPTPVGDLNREAAVPLLLRYGAKALAEQAKGAKISEKQLSR
QREKRAEASSVPDELLGEGRYEQIDDLEGLDRWIEKAISAGACALDIETDSLDAMLANPV
GFSLAVSPKQAAYLPLIAEGQRKFDDDAVRERLVRLTSSPSVRIIGHNFKYDYKVLRRWG
VVTKNLAFDTMVAAWLLDTTANSYGMDPLAASLLGYKTISFKDVVPKDGLFQDISVETAT
RYAAEDADITFRFYELFRRQLKERGLEKLFFELEMPLVPILAEMECAGITLLSDRLEAYG
RELEKDLGTIEDDIWQACGHSFNINSTKQLQQVLFEERKLTPIKKTKTGYSTDISVLEEL
AREDVVPLLVLRHRSLAKLKSTYVDALPKLVNPETGRIHTQLIQTGTATGRLSSKDPNLQ
NIPIRDEDGRRIRSAFVPAEGNLFISADYSQIELVVLAHLSEDPELSQAFRSGGDVHRRT
ASLIFDVSEADVSSEQRRIAKTINFGVMYGMSAFRLSRELGISRSRADSFISAYFRRYFR
IQSFMRKVVQETEQSGVSKTLLGRERSIPAINSRNKTEKAGAERIAVNTPIQGTAADIVK
LAMLAVSRRMASEELKSKMVLQIHDELLFEVPFDEADRMEGLLKEEMESAVKLSVPLRVS
IERGGSWGDLH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagatcggaagaaacaaccacactctatctgcttgacggctatagtattatttac
cgttcctattttgccttcatggggaggcatctcagtgcgcccgacgggacgaatgtttcg
gcccttttcggatttttccgaacccttttttcaatccttgatgaataccgccccggcgcg
ctcgccgtcgtgctcgactcaagggttcctacctttcggcatgagatgtatcccgagtat
aaggccaatagggaaaaggctcccgaggaattacacgcccaggtcccgatgatcgaggaa
atcctcggtgtcatgggaatgaccgtcttgcgaaaagatggtgtagaggccgacgatatc
atcgccaccatggccgaacggtgcaggaaaaaggatcgtccctgtgtcattgtgaccggc
gacaaggatcttttgcagcttctcgggggagagatccgtatgctgcgtcccgaaaaggga
ggctatcagctcatcggtagggacgatgtcttcgatcagtggggtgtcgaggctgatcag
atcgtcgattatctttcccttaccggcgatcaggccgataatgttcctggggtcaaaggg
atcggtcccaagaccgcttccaagcttttaacgaaattcggtgatctcgacggggtgtat
gcaaacctcaatgcatgcagtacgggagagcgggcaaagctcgaggcctcccgggaggat
gcctttctcagccgctcccttatcatcctgaaaaaagatgtgtcccttcctcctgaggct
cctactccggtgggggatcttaaccgcgaagctgcagtccctcttctgttgcgttacggt
gccaaagcccttgccgagcaagcaaaaggggctaagataagcgaaaagcagctttcccgg
cagcgtgaaaaacgtgccgaggcttcctccgttcccgatgagcttctcggagaggggcgt
tatgagcagatcgatgatcttgaaggtcttgatcgatggattgaaaaggctatatcggcg
ggtgcttgtgcccttgatatagaaaccgacagcctggatgccatgctggccaatcctgtc
ggcttttcattggccgttagcccgaaacaggctgcttatctgccacttattgcggagggg
cagcgaaaattcgacgatgatgccgtgcgtgaacgccttgtgcgcctcacttcaagccct
tcggtccgcattatcgggcataacttcaaatacgattacaaggtcttgcgtcgctgggga
gtggtcacgaagaaccttgccttcgataccatggtcgccgcatggctgctcgataccacg
gccaacagctatggcatggatccccttgccgcttcgctcttgggctataagaccatctct
tttaaggatgtggtaccgaaggatgggctgttccaggatatctccgtggagacggcaacc
cgctatgcagccgaggatgccgacatcacctttcgcttctatgaactttttcgtcgccaa
ctgaaggaacggggcctcgaaaagctttttttcgagcttgagatgccccttgtgcccatc
cttgcggagatggagtgtgccggcattaccctgctttccgaccgcctggaggcatatggc
cgggaacttgaaaaggatcttggaacgatcgaggatgatatctggcaggcctgcggccac
agcttcaatatcaactcgacaaagcagcttcagcaggttctcttcgaggagcggaagctc
accccgataaagaaaaccaaaaccggttattcgaccgatatctccgtgctggaggagctt
gccagggaagacgttgtgcccttgctggtccttcgtcatcgcagcctggcaaaactcaaa
tcaacctatgtcgacgccctgcccaaactggttaacccggaaactggcaggattcatacc
cagctgatccagaccgggaccgctaccgggcgtctttccagtaaggatcccaatctccag
aatatccccatccgggatgaggacggccgaaggatccgctctgcctttgttcctgccgaa
gggaatctttttatctccgctgactacagtcagatcgagctggtggttcttgcccatttg
tccgaagaccctgagctttcccaggcctttcgcagcggaggggatgttcaccgccgtaca
gcctccctgattttcgatgtgtcagaagcggatgtcagctctgagcagcggcggattgcc
aagaccattaattttggtgtgatgtacggcatgtccgcctttcggctgagccgtgaattg
ggaatatcccgaagcagggccgattcctttatctccgcctattttcgccgttatttcagg
atccagagcttcatgagaaaggtggtgcaggagacagagcagagcggggtaagcaaaacc
cttctcggcagagagcgttccatccccgccattaacagtagaaacaagacggagaaggcg
ggggccgagcgcattgccgtcaacacgccgattcagggcactgccgccgatatcgtgaag
ctggccatgctcgccgttagtaggcgaatggcctctgaggaactgaaaagcaagatggtc
ctgcagatccatgatgagctgctgttcgaggttccctttgatgaggccgaccgtatggag
gggctgctgaaagaggagatggagtcggcggtgaagctctcggttcctttgcgggtaagt
attgagcgaggtgggagctggggagatctccattga
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