Sediminispirochaeta smaragdinae: Spirs_3684
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Entry
Spirs_3684 CDS
T01287
Name
(GenBank) pyridoxine biosynthesis protein
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00750
Vitamin B6 metabolism
ssm01100
Metabolic pathways
ssm01240
Biosynthesis of cofactors
Module
ssm_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Spirs_3684
Enzymes [BR:
ssm01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
Spirs_3684
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
NanE
His_biosynth
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
ADK82770
UniProt:
E1R7R5
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Position
3971307..3972176
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AA seq
289 aa
AA seq
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MDRSREKINKGFAEMFKNGVIMDVTTPDQAKLAEDAGACAVMALERVPADIRKAGGVARM
SDPAMIRSIMEAVSIPVMAKCRIGHITEARILEALEIDFIDESEVLTPADEERHIDKKLF
KVPFVCGARNLGEALRRINEGASMIRTKGEAGTGNIVEAVRHTRTIAGEIAGLQGLDEEG
LKRKAAEYRVPIELVEQTATLKRVPLVNFAAGGVATPADAALMMELGSDGVFVGSGIFTS
EHPEKMAAAIVEAVIHYQDPKRLADISSGLGAAMKGLEIATLQTVMAGR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggacaggtcacgagaaaagatcaacaagggtttcgccgaaatgttcaagaacggcgtc
atcatggatgtaacaaccccagatcaggcaaagctcgccgaagatgccggagcctgtgcg
gtcatggcacttgaacgggtgcccgccgatatcagaaaggcggggggcgtggcacggatg
agcgatccggccatgatccgttcgatcatggaagcggtgagcatccctgtgatggcaaaa
tgcaggataggtcacatcaccgaggcacgtatcctggaggcgctggagatagactttatc
gacgagagcgaggtgctgacgcccgcggatgaagaacgccacatagacaagaagcttttc
aaggttccctttgtctgcggtgcaagaaaccttggtgaggcacttcggcgtatcaatgaa
ggggcaagcatgatcagaaccaagggcgaagcgggtaccggcaacatcgtcgaagcggtt
cgccacaccagaacgattgcaggcgagatcgccggcctgcaggggctcgacgaggaaggt
cttaagcggaaagctgccgaataccgggtacccatagaacttgtagaacagacggccaca
ttgaaaagagttccgctagtcaactttgccgccggcggggttgcaacaccggctgatgca
gccctcatgatggagctgggcagcgatggtgtctttgtcgggtccggcatctttaccagc
gaacatccggaaaagatggcggcggcgattgtggaagcggttattcactaccaggacccg
aaacgcctggccgacatctcatccggcttgggggccgccatgaaggggcttgagatagcc
acgctccagacggttatggcgggaagatga
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