Sediminispirochaeta smaragdinae: Spirs_3758
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Entry
Spirs_3758 CDS
T01287
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssm03009
]
Spirs_3758
Enzymes [BR:
ssm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Spirs_3758
Ribosome biogenesis [BR:
ssm03009
]
Prokaryotic type
ribosomal protein modification factors
Spirs_3758
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ADK82844
UniProt:
E1R7Y9
LinkDB
All DBs
Position
complement(4052508..4053833)
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AA seq
441 aa
AA seq
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MTHKRYYIEKLGCAKNQVDAEIIAARLDDAGWQYVEDAGAADLIIINSCGFIEAARQEAV
NVTLSARADYPKARILFAGCMAQRYGARLLEEMTEIDGVFGNFAVDDITDILEPLFEDKR
PVLLPEETKLACNRNRLFSFPGSSYLRISEGCNHFCSYCAIPLIRGSLRSVPMEQVVKEA
DRLIRNGVKEINLVAQDLAAYGTDQGTASLFPELLRRLSSLEGDFWLRMLYIHPDHFPKE
IFPILQADSRILPYFDIPLQHAHPKILSSMGRRGDAEGYLALIREIRSALPDATIRSTFL
LGYPGEGGKEAAALESFIAEARLDWAGFFLFSREEGTKAALLRGPLMQRLAMPAAERRLR
RLQKLQESISMERAALRVGIETKVLIEEPVKEEDVALGRAWFQAPEVDGATVVSAPALKA
GDWMTCRIVRSNGFDLEAVCV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgacgcataaacgctactatatagaaaaactcggctgtgccaagaaccaggttgatgcc
gaaataatcgccgcaaggcttgacgatgcaggctggcaatacgtagaggatgccggagcg
gcagatctcatcatcataaacagctgtggttttatcgaagctgcacggcaggaggcggtt
aatgtgaccctttccgcccgagccgactatccgaaggctcgaattctttttgccggttgt
atggcgcaacgttatggggcccgactccttgaagagatgaccgagatcgacggggttttc
gggaatttcgccgtcgatgatatcacggatattcttgaaccgctttttgaggataaacgg
ccggtactcttgcctgaggagacaaaactcgcctgcaacaggaatcggcttttttccttt
cccggcagctcttacttgagaatttccgaaggctgcaatcacttttgttcctactgtgcc
attcccctcattcgcggctcgcttcgcagtgtgccgatggaacaggtcgtgaaagaggcc
gatcggcttatcaggaacggtgtgaaagagatcaatctcgtggcccaggatcttgccgcc
tacgggacggaccagggaacagcttccctgtttcccgagcttctgagacgcctctcctcc
ctggagggggatttttggcttcgcatgctgtacatacatcccgatcatttcccaaaagaa
attttccccattctgcaggccgattcccggattcttccctatttcgatattccccttcaa
catgcgcatcctaaaattctctcgagcatggggcgccggggagatgcagaaggctatctt
gccttgatcagggagatccgttctgcacttcccgatgccacaatacgatccacctttctt
ctcggctatccgggagaaggggggaaggaagccgccgctttggagtcctttatcgccgaa
gcacggctcgactgggccggttttttcctgtttagccgtgaagagggcacaaaagccgct
ctgttgcgtgggccgctgatgcagcgtcttgccatgccggcagccgaaagacgccttcgg
cgccttcagaaacttcaggaatccatcagcatggaacgggccgcattgcgggtcggcatc
gagacaaaggtcttgattgaagagcctgttaaagaagaggatgtagcccttggccgggcg
tggttccaggcccctgaggtggatggggctacggtcgtttccgctcccgctcttaaggcc
ggcgattggatgacctgtcgaattgtacgaagcaacggatttgatctggaggctgtctgt
gtatga
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