Sediminispirochaeta smaragdinae: Spirs_3934
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Entry
Spirs_3934 CDS
T01287
Name
(GenBank) Hemagluttinin repeat-containing protein
Organism
ssm
Sediminispirochaeta smaragdinae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Motif
Other DBs
NCBI-ProteinID:
ADK83019
UniProt:
E1R950
LinkDB
All DBs
Position
complement(4243986..4248941)
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AA seq
1651 aa
AA seq
DB search
MADSSSMSRRDIRKPLSFLLFLLLLGGAQTGWGQSLIPSTPGNYLQVTGSAATGDNDTFM
VVFFSVPDDTSGPLYFAIDDPYLSGTSPDDGTDTAGGDSWDFYLVGGSGTFSSPISRQVT
FGDIGEAANGSTLEELKFDGDGGGDNGWHYFSGVSPTQGEHIGNQYYFKVVAEAPNTDKN
AFRLNVSKTDSGDPTGIAGVRAFAYAWTLALLNNTGRTWELYPFVPDSATGNITAFFVDF
DNQDQGSVYNKTDRTTALASNLGNAATDSYSTAVTGQTNGTWYVELTETNGFPAINTALF
YAEGSSPAEAYRVYASDYFPAAPDHVSATAEDGSAISNGSDLERVLLQLVDDSGDAVPYV
RNIYLSVDGSAEIEATSDEAGLLNATERVVTTDSEGFAWVDVSDTVAENVTLTVITDGTT
GVASQSLTSSRLPSSGSLGVNDAPQLSFIADAYPTASSAFGTSFIEGATQAIAAITIAEA
GSFPSITAADGIRITIPTSKDVTFNTTPSSLSLSVSNGGGTVSYDNSNKTAVINVDTDFG
TIDSLTVSGLELTAAADSDTSFFLEFSFDGDLVAEVSDNKLIIVQDTASTYTWTGSNTTW
ADQTNWDSGDGTAGDDGYPGESVITDNVVIPGGLSNYPVLASAVTINDLSIGSGGELDIG
STVLTVNGDSSNDGRLILSGAAGQGTGLGSFDTDSGTIEYSGGGSVQLDNCYNIEFSSGT
YTLASDLTVKGDMTISGATVEDGGQAISISGDWNLSSGTFSANSDSGGTGTVEFVGSSIA
SLSGDTSFYNLTVQRAGKIIKFGAGDAFTVDGTLYVVGVAGNLINLISSNPETQWTITNG
GGSETVQYVEVEDSAVGGTNDIAAYYSIDGDRNDTTSPGWNFFGTAWTWTGSISSAWGDE
GNWDSGDESAGNDGTPGAGDSVTIPFTSRDPQLTGAVTVDDLTIEAWVEFDLNDYDLTVS
GTLTNVGTLRAEGGGSVTASLNTDSGSVEYYGTGSYSHLAFGNSYYDLTISGGGSYALGA
ALTVENDLTVSSGTLDASGGADLLLGGDVDFSGGTFSKGTGTFTLQAADAQSLDPNAQDL
GAFLVAGSGTAVTPSGDLIVDSLTIDSGASLTIGTGISIDVGSGALTNAGTLISSGAITA
GDFSSTGTFTNAAANTISASGDVVISGSFGGTSTDNTLTMSGDGTRLDASENLGNLSVDP
GSGNTVSLANNALVLDGDLAINSGSLNVEGFGITVSGSFSNSDTLGFAGGESTVSLPSSP
IPGTVHYYGNSNTTGLVGGNSYTDLLFENSVDATSVTWTLSADLSVSDTLTVGSSTTLST
STAWNNVTVSGDVDVSSGTFDAGGSGTIKVGGDVSFGTLTGGSGSTLELDGSSAQAIVPN
GQSFGAVSLSGSGGVTLSGTGSFQSLTIAGGESLTLGGGAVTTGLTVNGTVTNGGSLYLN
SDDAGGPTSLYMADGTTIANSGVLQVVSSTGAVELSSPGTTTLTGNELDVNGESLNLGGF
ETAIDHTLGAGDAVTLVGDVSFSGTLTLNGTGASLTTGDNTLTTGSLTITEGTVAVSGSG
DVDVGSGAVTVGASGELTFNTTGSPALISGDFTSSGTVNNSQTSLVRASGNVEIDGSFGT
PANSTVEMSGASATINTVVQAGSLETSGSAG
NT seq
4956 nt
NT seq
+upstream
nt +downstream
nt
atggccgatagtagtagtatgagccgaagggacatccggaaaccactctcatttttgctg
tttctgcttcttttgggaggggcgcaaacaggctggggacaaagccttatcccttcaact
cctggaaactatcttcaggttaccggctctgcagccacaggtgacaatgataccttcatg
gtggtctttttctccgttcccgatgatacctcaggccccctctactttgccatcgatgat
ccttatcttagcggaacaagtcctgacgacgggaccgacactgccggaggggactcctgg
gatttttatctggtgggggggagcggaaccttctcaagcccaatatccaggcaggtaacc
ttcggagatataggagaggccgcgaacgggtccactcttgaagaacttaagtttgatgga
gatgggggaggagacaacgggtggcattacttttccggtgtctctcccactcagggagag
catattggaaaccaatattactttaaggtggtggcggaagctcccaacacagacaaaaat
gcttttcgtttaaatgtttcaaaaacagacagtggggaccccactggtattgccggggtg
cgggcctttgcctatgcctggacccttgctctgcttaacaacacaggaagaacatgggag
ctgtacccctttgtgccggacagtgcgacaggaaatattactgcctttttcgttgatttt
gacaatcaggatcaaggaagtgtctataataaaaccgatcgcacaaccgcccttgcttcg
aatcttgggaatgctgctactgattcttattctaccgctgtgaccggacaaaccaatggc
acatggtatgttgaactgaccgaaacaaatggttttcccgctattaatacagcgctcttt
tatgccgagggttcttcaccggcggaagcgtatcgcgtttatgcctccgactatttcccc
gcagctcccgaccatgtgtctgccacggccgaagatggtagtgctatttcgaacggcagc
gatctggaacgtgttcttcttcaactggtggatgactcgggtgatgcggttccttatgta
cgaaatatctacttgtcggtcgacggttctgcagaaatcgaggccaccagtgacgaagca
ggccttctgaatgctaccgagcgggtggtcaccaccgacagtgaaggctttgcctgggtc
gatgtgagcgataccgttgcagaaaacgtaacactcaccgtcattaccgacggaacaacg
ggtgttgcctcgcaatcgttaacgagtagtcgactcccctcaagcggaagcttgggagta
aacgatgccccgcagctttcgtttattgcagatgcatatccaaccgcatcctctgcattc
ggtaccagttttatcgagggagccactcaggctattgcagctattaccattgcagaggcc
ggttctttcccttcgattaccgcggcggacggtattcggatcacgatcccgaccagcaag
gatgtgacatttaatacgacgccttcttctcttagtctgtcggtctcaaatgggggagga
accgtctcgtacgataacagtaataagactgcagtaattaatgttgacactgattttggg
actattgatagtctcaccgtttccggtcttgaactgacggctgccgccgatagcgacaca
agcttttttctggaattctcctttgatggagatcttgtggccgaggtctctgacaataag
cttattatcgtgcaggataccgcctcgacttatacatggacaggttcgaatactacatgg
gccgatcagacgaactgggatagtggtgacggaacagcgggagatgacggctatcccggt
gaaagcgtcatcactgataatgttgttattcccggcggcctctcaaactaccctgttctt
gcaagtgccgtgaccataaacgatctgagcataggctcgggcggtgaacttgatatcggc
tcaactgttcttaccgttaatggtgattcctccaatgatggacgactcattctgtccggt
gccgcaggtcagggtaccggtctgggtagttttgataccgatagcggaaccattgagtat
tcaggtggaggaagtgtccagcttgacaactgttataacatcgaattctcctccgggacc
tatacccttgcctctgatcttaccgtcaagggtgatatgaccataagcggagccaccgtt
gaggacggagggcaggcaatcagcatcagtggcgattggaatctttcttccggtaccttt
tccgccaatagtgattcaggcggtaccggaactgtcgagtttgtcggcagtagcattgct
tctctttcaggagatacctccttttataatcttacggtgcagcgggccggaaagatcata
aagtttggtgcgggcgatgcttttaccgttgacggtacgctttatgtggtaggtgttgcc
ggaaatctcatcaacctgatcagtagtaatcccgaaacccaatggaccattaccaacgga
ggcgggagtgaaaccgttcagtatgttgaggtcgaggatagtgccgtaggaggtacgaac
gatatcgctgcctattattcaatagatggcgaccgtaacgatactacttctccgggttgg
aatttcttcgggacggcctggacctggaccggctcaataagcagcgcctggggcgatgag
ggaaattgggacagtggtgacgaaagcgccggaaacgacgggactcccggagccggagac
agtgtaacaattccctttacatcgcgtgatcctcagcttaccggagcggtgacggtagat
gatttgacgattgaggcgtgggtcgagtttgaccttaacgactatgatctgacggttagt
ggaacgcttacgaatgtcgggaccctccgagccgagggcggagggtctgtgaccgccagc
cttaataccgacagcggtagcgtcgagtattacggtaccggctcctattcccacctcgct
ttcggtaattcatactacgatcttaccatttccggcggcggaagctacgctcttggggcg
gcactcaccgttgagaacgatctgacggtttcctccggaactctggatgcctcgggaggc
gccgatcttcttcttggcggtgatgttgatttcagcggcggtacattttccaaagggacg
ggaacctttacccttcaggcggcagatgcccagagtcttgatcctaacgcacaagacctc
ggggctttccttgtggccggtagcggaactgccgttaccccttcgggagatcttatcgtg
gattcgcttaccattgattccggtgcctctttgacgattgggacgggcatcagcatcgat
gtaggaagtggtgcgcttaccaatgcgggaaccctcataagctccggggccattactgca
ggagatttctcgtctaccgggacctttaccaatgctgcggccaataccatctctgcatcg
ggcgatgtcgtcatatcaggaagcttcggtggtacttcaaccgacaacaccttgaccatg
agtggggacggaacaagacttgacgcctcggaaaacttggggaatctgagcgtcgatccc
ggtagtggcaacaccgtttcccttgcaaataacgcccttgttctcgacggtgatcttgcc
attaacagcggaagccttaatgtggagggctttggaatcacggtctcaggctctttttcc
aattccgataccctcggctttgccggtggagagagtacggtatcccttccttcgtcaccg
atacccggtacggtgcattactatggcaacagcaacaccactggcttggtaggaggcaat
tcctataccgatctgctattcgagaacagtgttgatgcaacttctgttacctggacgctt
tcagccgatctttccgtatccgacacgctaacagttggctcgtctaccaccctttccact
tccactgcgtggaacaacgtaacggtgagtggagatgtggatgtaagtagcggaacgttt
gatgccggaggatccgggacgattaaggtgggaggagatgtcagcttcggaacgctgact
ggcggatcgggatcgacgctggagcttgacggaagcagtgcccaggctatcgtgccgaac
ggacagagctttggagcggtaagcttaagcgggagcggaggagtgacgctgagcgggacc
gggagttttcagtcgctgacgatagcaggaggagagagcctgaccctgggaggaggggcg
gtaacgacggggctgacggtgaacggaaccgtgacgaacgggggaagcctctacctgaac
agcgacgatgccggaggaccgacgagtctgtatatggcggacgggacaacgatagcgaac
agcggagtattgcaggtggtatcatccacaggggcggtagagctgtcgagcccgggaacg
acgacactgacgggaaacgagcttgatgtaaacggagaaagcctgaacctggggggattt
gaaacggcgatagatcatacccttggggcgggagatgcggtaacactggtgggagatgta
agcttcagcggaacgctgaccctgaatgggacgggagcatcgctgacgacgggagacaat
acactaacgacgggaagcctgacaataacggaagggacggtagcggtaagcgggagcggg
gacgttgatgtgggaagcggggcggtgacggtcggagccagcggagagctgaccttcaat
acgacgggaagtcctgcgcttataagtggagactttacaagcagtggaacggtgaacaac
agccagacatccttggtgagggcgtccgggaatgtggagatagatggaagttttggaacg
cctgcgaactcgacggtagagatgagcggtgcgagtgcgacgatcaacacggtggtgcag
gcgggaagccttgagacaagcggaagtgcggggtga
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