KEGG   Sediminispirochaeta smaragdinae: Spirs_4003
Entry
Spirs_4003        CDS       T01287                                 
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
  KO
K02621  topoisomerase IV subunit A [EC:5.6.2.2]
Organism
ssm  Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:ssm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssm03032]
    Spirs_4003
   03036 Chromosome and associated proteins [BR:ssm03036]
    Spirs_4003
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ssm02048]
    Spirs_4003
Enzymes [BR:ssm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     Spirs_4003
DNA replication proteins [BR:ssm03032]
 Prokaryotic type
  DNA Topoisomerases
   Spirs_4003
Chromosome and associated proteins [BR:ssm03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Spirs_4003
Prokaryotic defense system [BR:ssm02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    Spirs_4003
SSDB
Motif
Pfam: DNA_topoisoIV
Other DBs
NCBI-ProteinID: ADK83088
UniProt: E1R9B9
LinkDB
Position
complement(4330046..4331977)
AA seq 643 aa
MSYVKTLFNRNFLEYASYVIKDRAIPDIGDGLKPVQRRILHSLFEVDDGKFHKVANIVGH
CMKYHPHGDASIYSALVVLANKDLFIDKQGNFGNPITGDEASAARYIECRILPFAKKVLY
SPQVTEYVDSYDGRNREPVVFPSKIPVLLIQGAEGIAVGMSTKILPHNFEEVLRAVVSEL
KGEPFQLFPDFPNGGLVDVSDYQDGLGKVLIRAKLDTKDPKRIIIKEIPFGTTTESLIAS
IEAAARKGRVKISQINDYTSEAVEIEIKLARGVYTKEVVDSLFAYTDCEYSVSVNLLVIK
DGLPTQMTVPEVIRYHARQLVAVLEAELKVEEADLKEKIHARTLERIFIEERIYKRIEEM
KTRETVISAVIEGFKPFKKEIPREVTEEDVERLLKIPIRRISLYDIEKARKELAELQGRL
KEVRYHLKNLVAYAIGFIEGVLKDTAGRFPRRTKVGRFEKVDVREVAARDLDLRYDAKTG
YLGYDLKGGDSLFAVNQYDRVLIIRGDGTYRVTDVPEKMFVGKGLMYCGIADKEELADCH
FSIVYQDTVTKHLYIKRCTIEQFILEKDYDLLPEGAKPLAFTTREDQEIVLNYKPKPRLK
ILEENFRVSDFLVKSVKAGGVRLSTKEVKSLKLRKAKKKAEDA
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgagctatgtaaagaccctcttcaatcgtaacttcctcgagtatgcatcctatgtcatc
aaggatcgggccattcccgatatcggcgacggtcttaagccggtacagcggcgtattctt
cattcgctctttgaggtcgacgacgggaaattccacaaggtggccaatattgttgggcac
tgcatgaagtatcatcctcacggagatgcaagcatctattctgcattggttgtgcttgcc
aataaggatctattcatcgacaagcagggaaatttcggtaatcccataacaggagacgag
gcgtccgccgcccgatatatcgaatgccgtatcctgccctttgcgaagaaggtgctctac
agccctcaggtaacagagtatgtggacagctatgatggccggaaccgtgagcctgtagtc
tttccctcaaagattcccgtgcttctcattcaaggcgccgagggcatcgccgttggtatg
tcgaccaagatcctgccccataactttgaagaggtgcttcgggcggttgttagcgagttg
aaaggagagccttttcagcttttccctgatttcccaaacggcggattggtcgatgtttcc
gattatcaggatggtcttggaaaagtcctcatccgggcaaagctggacaccaaggacccg
aagcggatcatcattaaggaaattccctttggaactactaccgaaagccttatcgcttcc
atagaggcggcggcccgaaaggggcgggtcaaaatcagtcaaatcaacgactataccagt
gaagcggtcgagatcgaaatcaaacttgccagaggtgtttacaccaaagaggtggtagac
agcctttttgcctacaccgactgcgaatattcggtcagcgtaaaccttcttgtcataaag
gatggattgcctacccagatgaccgtccccgaggtgattcgctaccatgcgcgccagctt
gtggctgttcttgaggcggagctgaaggtcgaagaggccgatctgaaggaaaagatccat
gcaagaaccctggagcgtatcttcatcgaagagaggatttataaacgcatcgaagagatg
aagacgcgagagacggtgatttctgcggttatcgaaggatttaaaccctttaagaaggag
attccgcgggaagtgacggaagaggatgtggaacggcttctgaaaattccgatccggcga
atcagcctctacgatatcgaaaaggcacgtaaggaattggccgagttgcagggacgcctg
aaagaggtccgttatcatttgaaaaatctggtggcttacgctatcggttttatcgagggg
gtcctgaaggataccgcgggacggtttccccgccggacaaaggtgggccgttttgaaaag
gtggatgttcgtgaggttgccgctcgtgatcttgatctgcgttatgacgccaagaccggg
tatcttggctacgatctgaaaggcggcgactctctttttgcggtcaatcagtacgatcgg
gtactgattattcggggagacggaacctaccgggtaaccgatgttcccgaaaagatgttt
gtcggtaagggattgatgtactgcggtatcgcggacaaagaagagctggccgactgtcac
ttttccattgtgtatcaggatacggtaaccaagcatctctatatcaagcgatgcaccatt
gagcagtttatcctggagaaggattacgatcttttgcccgagggtgcaaagccccttgcc
tttaccactcgtgaggatcaggagatcgttctgaactataaaccaaagcctcgccttaaa
attttggaggagaattttcgggtttccgattttttggtgaaaagcgtgaaggccggagga
gtcaggctttccactaaggaagtaaagagccttaagcttagaaaggcaaaaaagaaggcg
gaagatgcctga

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