Sediminispirochaeta smaragdinae: Spirs_4015
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Entry
Spirs_4015 CDS
T01287
Name
(GenBank) succinate dehydrogenase and fumarate reductase iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00020
Citrate cycle (TCA cycle)
ssm00190
Oxidative phosphorylation
ssm00650
Butanoate metabolism
ssm00720
Other carbon fixation pathways
ssm01100
Metabolic pathways
ssm01110
Biosynthesis of secondary metabolites
ssm01120
Microbial metabolism in diverse environments
ssm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Spirs_4015
00650 Butanoate metabolism
Spirs_4015
09102 Energy metabolism
00190 Oxidative phosphorylation
Spirs_4015
00720 Other carbon fixation pathways
Spirs_4015
Enzymes [BR:
ssm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Spirs_4015
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer2
Fer4_9
Fer4
Fer4_16
Fer4_2
Fer4_17
Fer4_4
Fer2_4
Fer4_3
Fer4_21
Fer4_7
Fer4_18
DNA_photolyase
Fer4_6
Motif
Other DBs
NCBI-ProteinID:
ADK83099
UniProt:
E1R9D0
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Position
4347315..4347965
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AA seq
216 aa
AA seq
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MDISLRIFRGIGPITESRDEEFSDFHFTAKESDTILDLLMKAGLEDASLLFRHSCHHGSC
GTCACIIDGTERLACRTPVSEFQATSRIEIRPLNGFPRIKDLVVDMSPLFEKTDETWPYL
RRSERDGKRFEDCIECGACMSACPVTEPFQGPAPLAFLHRRLESLDAKAEEERKELLSRA
GESDAVPACQEHFACSRVCPQRVAPGRRIRELRNLL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggatataagcttacgaatttttcggggtatcgggccgataacagaaagcagagacgaa
gaattctcggactttcacttcactgccaaagaatcggataccattcttgatcttttgatg
aaagcgggccttgaggatgcatcgctgcttttccgtcattcctgtcatcatggctcctgc
ggtacctgtgcctgtatcatcgacggtacggaacgcctcgcctgcagaaccccggtttcg
gaattccaagccacctcgcgcatcgagatacgtcctctgaacggctttccccggattaag
gatctggtggttgatatgtccccgctgtttgaaaagacggatgaaacctggccttacctc
cgccgaagcgaaagagacggaaagcgatttgaagattgtatcgaatgcggggcctgcatg
tccgcctgtccagtgaccgaaccctttcagggaccggctccgcttgcctttctccatcgc
agacttgaaagcctggatgcaaaggcggaagaggaacggaaggaactgctgtcgcgggca
ggagagagcgacgctgttcctgcatgccaagagcactttgcatgcagcagggtctgtcct
cagcgtgtcgcacccggccgaaggattcgtgagcttcgaaatttgctctga
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