Sediminispirochaeta smaragdinae: Spirs_4017
Help
Entry
Spirs_4017 CDS
T01287
Name
(GenBank) biotin/lipoyl attachment domain-containing protein
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00020
Citrate cycle (TCA cycle)
ssm00620
Pyruvate metabolism
ssm00720
Other carbon fixation pathways
ssm01100
Metabolic pathways
ssm01120
Microbial metabolism in diverse environments
ssm01200
Carbon metabolism
ssm01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Spirs_4017
00620 Pyruvate metabolism
Spirs_4017
09102 Energy metabolism
00720 Other carbon fixation pathways
Spirs_4017
Enzymes [BR:
ssm01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
Spirs_4017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
Biotin_lipoyl
Biotin_lipoyl_2
HMGL-like
HlyD_3
GCV_H
HlyD_D23
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
ADK83101
UniProt:
E1R9D2
LinkDB
All DBs
Position
4348363..4350165
Genome browser
AA seq
600 aa
AA seq
DB search
MKKRVDFMVTAFRDGFQSAFGARVLTKDFLPAVEAAVDAGITHFEAGGGARFQSLYFYCN
EDAFDMMDQFRQAAGPDANLQTLARGVNVVGLDSQSRDIINLHAKMFKKHGITTIRNFDA
LNDVNNLIYSGQCIVDAGLKHEVSITMMELPPGAKGAHTPEFYMSVLKQILDAGIKFDSI
CFKDASGTSVPSKVYETIKQARAMLGADTHIVFHSHETAGTSILAYKAALDAGANQIDLS
MAPVSGGTCQPDIITMWHALRGTEYDLGIDIEKVRKAEAVFKECMKDYFVPPEATAVEPL
IPFSPMPGGALTANTQMMRDNGILDKYTEVAAAMGEVVMKGGYGTSVTPVSQFYFQQAFN
NVMVGPWKKIAEGYGKMVLGYFGKTPVAPDPEIVKLASEQLGLEPTTKIPVDINDEDSSK
GIGAAKKMLEEAKLPISDENIFIAAACKEKGIQFLKGEAKVNVRKIDPNAAKAEAAGGEA
KSGAGNYTVNVGGKRFNVTLEGNTALVNGKSYTVEVGAGTDAGAPVAGGAGQNVEAPMPG
LVLRIEKEVGDTIEEGELLLVLEAMKMETEIHAPCSGTITEIPVKQGDQMKAGDILAVIS
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcgcgtagattttatggtaacggccttccgagacggtttccaatcggccttc
ggagcacgagtgctgaccaaagacttccttcccgcggtcgaagcggccgttgatgcggga
attacccacttcgaggcaggcggcggagcccgttttcaaagcctctatttttattgtaat
gaagatgcattcgacatgatggaccagtttcgccaggcggcgggaccggatgccaacctc
cagacccttgcgaggggtgtgaatgtcgtcggactggacagccagtcgagagacattatc
aaccttcatgcaaaaatgtttaaaaagcatggaataactacgatcaggaacttcgacgcc
ctcaacgacgtcaacaacctgatctattccggccagtgtatcgttgatgccggtctgaaa
cacgaagtgtccatcactatgatggaacttcctccgggagccaaaggtgctcacacaccg
gaattctacatgagtgttttaaaacagatactagacgctggtatcaagttcgacagcatc
tgtttcaaagatgcatcgggaacaagtgttcccagcaaggtgtacgaaaccattaagcag
gcacgggcaatgctcggtgcggatacccacattgtattccacagccatgagaccgcagga
acaagcatattggcttacaaggccgctttggacgcaggcgcaaatcagatcgatctttcc
atggcacccgtatcggggggaacctgccagcctgacatcatcaccatgtggcatgccctt
cgcggtaccgaatacgatctcggcatcgatatcgaaaaagtgcgaaaggccgaagcggtc
ttcaaggagtgcatgaaagactattttgttccacctgaggcaaccgctgttgaaccgctg
attccttttagtcccatgcccgggggagctcttaccgccaacacccagatgatgcgggat
aacgggatcctggacaaatataccgaagttgctgcggccatgggagaggttgttatgaag
ggtggttacggaacatccgttaccccggtcagccagttctattttcagcaggccttcaac
aacgtaatggttggaccctggaagaaaattgcagagggctacgggaaaatggtactcggc
tatttcggcaagaccccggtcgcaccggatcccgaaatcgtcaaacttgccagtgagcag
ctcggcctggaacccacaaccaaaatcccggtggacattaatgatgaagattcttccaag
ggcataggagctgcaaagaagatgctcgaagaggcaaaactgccgatcagtgacgaaaat
atcttcattgccgcagcctgtaaggaaaaaggaattcagtttctcaagggcgaagccaag
gtcaatgtacgaaagatcgatccaaatgccgcaaaggcagaggctgcaggcggagaggct
aaatcgggagccggtaactataccgtcaacgtaggcggcaaacggttcaacgtcacgctc
gaagggaataccgcccttgtcaacggcaaaagctacaccgttgaagtgggcgcgggaacg
gatgcaggagcaccggttgccggcggagcaggacagaacgtcgaagcccccatgcccggc
ctggtactccgcatcgagaaagaggtcggcgacaccattgaagagggtgagctgcttctt
gttctcgaagccatgaagatggaaaccgaaattcacgcaccctgttccggaaccattacg
gaaataccggttaagcagggcgatcaaatgaaagcgggcgacatcctggccgtcatctcc
taa
DBGET
integrated database retrieval system
