Sediminispirochaeta smaragdinae: Spirs_4110
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Entry
Spirs_4110 CDS
T01287
Name
(GenBank) ABC transporter related protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_4110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_4110
Transporters [BR:
ssm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Spirs_4110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
DUF87
SMC_N
AAA_29
AAA_16
nSTAND3
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ADK83191
UniProt:
E1R9M2
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All DBs
Position
4439804..4441537
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AA seq
577 aa
AA seq
DB search
MLKEFKTLLPMVKKYRWWYVAGLISLIITDAGELLIPQMIKQATNIIASGSFFPAAIATP
VLIMIALAAIVALSRFGWRFFLHGASRRIERDLRDKLFAHLLTLSPSFYGTMKTGDIMAR
ATNDMRAIRMATGMALVAFMDGLFLTLAILIILFTTNPALAAITIIPLPLITIIILAFGT
VIGQRFKAVQEGFSRLSEHVQETLSGIRVLKSFVRESWAQERFVDTSDAYMQKNMQLVKL
WGFFFPLIVFISGLTSLLLMRFGGVAVMLGSFTPGDFVAFLTYLSMLQWPVIGMGMTVNM
IQRGAASLGRINMILNEKPDIVSPPRGRTNIDHTGIEIKKLSFSYPDSEIKALDQVDLML
EEGKTLGILGRTGSGKSTLVRILPRLLDPPSGTVFLGGVDIREYDLETLRNAIALVPQDT
FLFSASVRENISFARPEADESEIMDAARISTIDREIEKFPKGWETEVGERGLSVSGGQKQ
RIAISRAILPNPPILIFDDSLSAVDTETEEKILNAFLEHRKGKSNILVSHRVSTLQWADY
IVVFDRGRIIQQGSHTQLLATEGLYRNIYLLQQEGSL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaaagagtttaaaacccttttacccatggtcaaaaagtaccgctggtggtatgtt
gccgggcttataagccttatcattaccgatgccggagagctgttgattccccagatgata
aaacaggccacgaatatcattgcatcgggaagtttcttccccgccgcaatcgcgaccccg
gtacttatcatgattgctctggcggcaatcgtcgccctctcccgctttggctggcgcttt
tttcttcatggcgcaagcagacgtatcgagcgggacctgcgggacaagctctttgcgcac
ctgcttaccctctccccatcattctacggcaccatgaagaccggagatatcatggcaagg
gcgacaaatgatatgcgtgcaatccgtatggcaacaggaatggccctggttgccttcatg
gatggtctttttcttacccttgcaatcctcatcatcctctttacgacaaatcccgctctg
gccgccataacgattatcccccttcccctgattaccatcatcatccttgccttcggcact
gtcataggacagcgattcaaggccgtacaagaggggttcagccgactgagcgaacatgtc
caggagacgctttccggtatccgggtgttaaaatccttcgtccgggaatcctgggcacag
gaacgattcgtcgatacaagcgatgcctatatgcagaaaaacatgcagctggtaaagctt
tggggcttcttcttcccccttatcgtgttcatctcgggactcacctccctgcttctaatg
agattcggaggagtagccgttatgctcggctcttttacgcctggcgactttgttgctttc
cttacctacctctcgatgcttcagtggcccgtcatcggtatgggaatgaccgtcaatatg
atccagcggggggcagcaagcctgggcaggataaacatgatcctcaacgaaaaaccggac
atcgtgtctcccccccgggggcgcacgaacatcgatcacaccggcatcgaaatcaagaaa
ctcagcttttcctatcctgattcggagatcaaggccctggatcaagtcgatctcatgctt
gaagaaggaaaaaccctcggcatcctcggaagaacaggaagcggaaaaagtaccctggtt
cgcatattgccgaggcttctcgatcccccctccggaacggtttttctcggcggcgtcgat
attcgggagtatgatcttgaaaccttaaggaacgcgatagcccttgttccccaggatacc
tttcttttcagcgcatcggtgcgggagaatataagctttgcgcggccggaagccgatgag
agcgagatcatggatgctgcacgaatcagcaccatagaccgggaaatagagaaatttcct
aaaggatgggaaacagaggtgggggaacgtggtctttccgtatccgggggacaaaagcag
cggatagcaatcagcagggccatactaccgaatccgcctatactgatcttcgatgattcc
ctttcggcagtcgatacggaaacggaggaaaagatactcaacgcctttctggagcaccgc
aaggggaaaagtaatattctggtaagccacagggtttcgacccttcagtgggccgattat
atcgtggtgttcgatcggggacgaatcatccagcagggaagtcatacgcagctgctcgcg
acagagggcctctatcgcaatatctatctgctgcaacaggaagggagcctctga
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