Sediminispirochaeta smaragdinae: Spirs_4111
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Entry
Spirs_4111 CDS
T01287
Name
(GenBank) ABC transporter related protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_4111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_4111
Transporters [BR:
ssm02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Spirs_4111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
AAA_30
SMC_N
AAA
AAA_22
Zeta_toxin
AAA_18
AAA_23
AAA_24
APS_kinase
DEAD
nSTAND3
SbcC_Walker_B
MMR_HSR1
RsgA_GTPase
NB-ARC
DUF87
AAA_25
SRP54
TsaE
Motif
Other DBs
NCBI-ProteinID:
ADK83192
UniProt:
E1R9M3
LinkDB
All DBs
Position
4441537..4443654
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AA seq
705 aa
AA seq
DB search
MEEEKIVKGYDPVIMRRLLGFVAPYKKLVTIALLAMVLATLAELLGPVILQRSIDQDIIN
RYHRVSLSKMDDALAERLFAPPVLPQLFHKSDPPLFGDNRFITSSMLERLSAEERKKLFD
ANIVDTMEWYLSGKLNNAEELLSTLPAEAEAMLQDGWIAMPASSLKKLDKESLGLLRAND
QKSLSHKTGVYLIFLIVMLLFSFLQVYLMAYTGQGVMRGLREKLYHHVMSQNLGYLGNVP
VGTLVTRVTNDVETINELFTSVATGLLRDFATMGGVIFILFYLDPHLALITSASLPPVVI
LAVIFRNRARDAYRRVRIWTSKVNAFLSEHISGMDVVQAFHREKRSQENFQKINGQLLSA
NLAEMYVFATFRPLISLLTSISIGTVLYFGASMVLNSAVSLGVMIAFVNLMQMFYRPVMD
FTENFTILQSAMAGGERIFNLLDRNEVIPDNGTTPIPAPVKGKIEFSHVNFGYTNDEQVI
RDLSFTIEPGETVAIVGYTGAGKTTIANLLTRLWDIEGGTVLLDGINISRISLSELRSTV
VPVQQDVFLFAASIRENITLGRDIPEQRVKAAAETVQSAPFIESLPRGYDTVLSERGANL
STGQRQLLAFTRVVAQNPRVIILDEATGSIDTETEKLIQKAMERLTQGRTSIVIAHRLST
IQHADRIMVLSGGRLVEMGNHAALLAKNGVYANLYRLQYKDAVQE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaagatcgtaaagggatatgacccggtcatcatgcgaagattgctcgga
tttgtcgctccctataaaaaattggtcaccatcgcccttcttgcaatggttctggcaacc
cttgcggaacttttgggcccggttattcttcagaggtctatcgaccaggatattataaat
cgataccaccgcgtctctctttcgaagatggacgatgctctggccgagcggctctttgct
ccgccggtccttcctcaactttttcacaaaagtgatcctcctcttttcggtgacaatcgc
tttatcacttcatcgatgctggaaaggctctctgccgaagaacggaaaaaactgttcgat
gcgaacattgtcgatactatggagtggtatctttccggcaagttgaacaacgcggaagag
ctgctgtcaacactaccggccgaagccgaagcaatgctccaggatggctggatcgccatg
ccggcatcatccctgaaaaagctcgacaaggagagtctcggccttctgcgtgccaacgac
caaaagagcctctcccacaagaccggtgtgtatcttatttttctcatcgtcatgctgctg
ttttcctttttgcaggtctacctcatggcctataccggccaaggtgtgatgagagggctc
cgggagaagctttaccatcatgtgatgagtcagaacctcggctatctcggcaatgtaccg
gtaggcactctcgttacgcgggtcaccaacgacgtcgaaaccatcaacgagctctttaca
tcggtggcaacgggattactcagagactttgccaccatgggaggcgtcatcttcatcctc
ttctatctcgatccgcatctcgcccttatcaccagtgcaagccttccgccggtggtgatt
cttgccgtcatcttcagaaatcgtgcaagagatgcctacagaagggtgaggatctggacc
agtaaggtcaacgcctttttgtcggaacatatttccggcatggatgtggtacaggccttc
caccgggaaaaaaggagtcaggagaacttccaaaagataaatggacagttgctttctgca
aatctcgcggaaatgtatgtctttgcaacctttcgtccgttgatcagccttcttacatcc
atctccataggaaccgttctctatttcggcgcttcaatggtccttaattcggcagtaagc
ctcggtgtcatgattgccttcgtcaatttgatgcagatgttttaccgaccggtcatggac
tttaccgagaattttacgattctccagtctgccatggccggaggagagcgaattttcaat
ctcctcgacagaaacgaggtgatcccagacaacggtaccacgcccatccctgctcccgta
aaaggaaagatagaatttagccacgtcaatttcggctatacaaacgacgaacaagtcatt
cgcgatctctcgtttaccatcgaaccgggagaaaccgtcgccatcgtcggttacacgggg
gcaggaaagacgaccatcgccaatcttctgaccaggctttgggatattgagggcggtacc
gttcttctggacggtatcaatatctcccggatatccctatcggagttgcgctccaccgtc
gtcccggtccagcaggatgtttttctttttgccgcttcgatacgggaaaatattaccctt
ggcagggatatccccgaacagagggtcaaagcggcagcagaaacggttcaaagtgcccca
ttcatagagtcccttcccaggggctacgatacagtgctcagcgaacggggggccaatctt
tccacagggcaaaggcagttgctcgctttcacaagggtcgtggcccagaacccccgggtc
attatcctcgacgaggcgacgggaagcatcgataccgaaacggaaaagctgattcaaaag
gcgatggaacggcttacacaggggaggacatccattgtgatagcccaccgcctttcaacc
attcagcacgccgaccgtatcatggtcctttcaggcgggcgcctggtggaaatgggaaat
catgccgctctgttagcaaagaacggtgtctatgcgaacctgtatcgccttcaatataaa
gacgctgttcaggaatga
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