Sediminispirochaeta smaragdinae: Spirs_4135
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Entry
Spirs_4135 CDS
T01287
Name
(GenBank) phenylalanyl-tRNA synthetase, beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Spirs_4135
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssm01007
]
Spirs_4135
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssm03016
]
Spirs_4135
Enzymes [BR:
ssm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Spirs_4135
Amino acid related enzymes [BR:
ssm01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Spirs_4135
Transfer RNA biogenesis [BR:
ssm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Spirs_4135
Prokaryotic type
Spirs_4135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synthFbeta
B5
PhetRS_B1
tRNA-synt_2d
DUF4313
Motif
Other DBs
NCBI-ProteinID:
ADK83215
UniProt:
E1R9P6
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All DBs
Position
complement(4470356..4472077)
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AA seq
573 aa
AA seq
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MPKIELYADALYGFAGKRYTEQGLEEVFPCAKAELDGSDPDEGILKVELNDTNRPDLWST
AGLGRQLCCYETGKLPSYSFFSTDDKPQDYGDRIVEVDPAIKETRPFIVAFAIFGKGVDE
ATLKDLIQTQEKLCWNFGRKRKSIAMGVYRSDLFAYPIRYKAVDPDTTKFVPLQEEREMS
LRQILNEHPKGKEFGHIVAADRLFPFIVDKDEKVLSFPPIINSAEIGAVKIGDGHLFVEL
TGTVMEDLALTASIVACDLADAGYTILPVKVVYPYDTPFGREVVFPRYFQQPIQAKVSYI
QKLLGEDLSAQECIEALSRMGVAASSDSSEDPVLTVRVPEYRNDFLHPADVAEDVMIGRG
VATFPPVFPSDYTIGRLSAEEHFARRIKDIMVGLGYQEMMYNYLGSRKDYIEKMHVEGKE
YIRIANPMTENYEYVRASILPNMLESESVSGNAVYPHKIFETGKIARLDETDNSGTVTKN
CLGFLISDREAGFNDALSHISAIFYYIAKEYDLRELDDPRFISGRCARIFSDGKELGLFG
EIHPVVLESWGIQMPCAGGEIDLDLLLAAKGEA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagattgaactatacgccgacgccctctatggtttcgccggaaaacgctataca
gaacagggccttgaagaggtttttccctgtgccaaggccgaactcgacggaagcgacccc
gatgaagggatcctgaaggtcgaattgaacgacaccaaccgtcccgacctttggtctacc
gcagggctgggacgccagctttgttgttatgaaacaggaaaacttcccagctattccttt
ttttccaccgatgacaagccgcaggactatggcgacaggatcgttgaagtggatcccgcc
atcaaagaaacgcgcccctttatcgtagcttttgccattttcggtaagggggtggatgag
gcgaccctcaaggatctgattcagacccaggaaaagctctgctggaacttcggacgaaag
agaaaatccattgccatgggggtctatcgcagcgatcttttcgcctatccgattcgctat
aaggcagtcgatccggatacaaccaaatttgttccccttcaggaagaacgggagatgagt
cttcggcaaattctcaacgagcaccccaagggaaaggagttcggccatattgtcgccgcc
gatcgtctcttcccctttattgtggataaggacgaaaaggtactcagtttccctcctatc
atcaacagcgcagagatcggtgccgtaaagatcggtgacggccacctctttgtcgaactg
accgggaccgttatggaggaccttgctttgacggcctcgatcgtcgcctgtgaccttgcc
gatgccggttatacgatcctgccggtcaaggtagtctatccctacgatacccccttcggc
cgcgaggtggtctttccccgctatttccagcagccgatccaggctaaggtttcttatatt
caaaagcttctcggtgaagacctttcggcacaggagtgcatcgaagccctttcccgtatg
ggcgttgcagcttcctccgacagttccgaggatcccgtgctgacggttcgtgtccctgag
tatcgcaacgattttcttcatcctgcggatgttgcagaagatgtcatgattgggcggggg
gtcgcgaccttccctcccgtgtttccttccgactataccatcggccgtctttctgccgag
gagcattttgcccgcagaataaaggatatcatggtcgggcttggttatcaggaaatgatg
tacaactatcttggcagccggaaagactatatcgaaaagatgcatgtagagggaaaagag
tatattcgtatcgcgaaccctatgaccgagaactacgaatatgttcgtgcctctatcctt
ccaaatatgctggaatcggaatcggtgagcggaaatgccgtatatccccacaaaatcttt
gaaacgggaaaaattgcacggcttgacgaaacggataattcggggacggttaccaagaat
tgcctcggctttctcatcagcgaccgagaggcggggttcaacgatgcactgagccacatc
tccgcaatcttctactacattgccaaggagtacgacctcagggaactggacgatccccgg
tttatttcaggccgctgtgctcgaatcttcagtgacgggaaggagcttggactgtttggg
gaaattcatcctgtggtgctcgaaagctggggaattcagatgccctgtgccgggggcgaa
atagatcttgatctgcttttagcggcaaaaggagaagcgtaa
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