Sediminispirochaeta smaragdinae: Spirs_4223
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Entry
Spirs_4223 CDS
T01287
Name
(GenBank) transcriptional regulator, AraC family
KO
K13653
AraC family transcriptional regulator
Organism
ssm
Sediminispirochaeta smaragdinae
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssm03000
]
Spirs_4223
Transcription factors [BR:
ssm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Spirs_4223
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Cass2
GyrI-like
IcmF-related_N
Motif
Other DBs
NCBI-ProteinID:
ADK83297
UniProt:
E1R9X8
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All DBs
Position
complement(4558760..4559638)
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AA seq
292 aa
AA seq
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MTGYECICEAINIFETSLRNAGRREIVRTVSQLAELTGYSIYHFTRLFFAVTGYSPKEYM
AGRIFSEAAQKIVESDFSLKSIARDFGFDEYETFSRGFKRVFGMPPRSVRRSHFLPAGYL
KRVMPEFERGTGNLLSDQPEIVAMDAYYLTGLPFYIEAGTTSFHKQWAIFMNVQEQVSGR
SLPELYCQYSSWSDNESVHGLSILCAIETVGDVQQKPFFYSRRVPSASYLRFRHNSEVSD
LWATYTYIYHDWFASHEIKPVGSWECQRYVDEGETIEICIPIALHEKDCRLE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaccggatatgaatgtatctgtgaagcgattaatatattcgagacatcacttcgaaat
gccggacggagggaaatcgtcagaacggtatcgcaacttgcagaactgactggctattct
atataccattttacgaggctcttttttgccgtgacggggtattccccgaaagagtatatg
gccggccgaattttttccgaggcggcacagaagatagtggagagcgatttctccctgaag
tccattgcgcgcgattttggtttcgatgagtatgagacattttctcgtgggtttaagaga
gtttttggtatgccgcctcgttccgttcggagaagtcatttccttcctgccgggtatctg
aaacgggtgatgccggagtttgaaagaggaaccgggaatcttctttccgaccaaccggaa
atagtagcaatggatgcctattacctaacggggcttcccttttatattgaagccggaaca
acatcgtttcacaaacaatgggcgatttttatgaatgttcaagaacaggtgtcagggcgt
tctctgccggaactctattgtcagtattcatcctggagcgataatgaatcggtacatggc
ctgtcgattctgtgtgctattgaaacggtgggtgatgtgcaacagaagccgttcttttat
tcgcggcgggttccctctgcttcctatctccggttccgccacaattccgaagtttctgat
ctatgggctacctatacatacatctatcacgattggtttgcttcacatgagatcaagccc
gtgggctcgtgggagtgtcagcggtatgtcgatgaaggagagacaattgaaatatgtatt
ccaattgctctccatgagaaagattgccggttagaatag
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