Shigella sonnei Ss046: SSON_0155
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Entry
SSON_0155 CDS
T00274
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSON_0155 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssn03019
]
SSON_0155 (pcnB)
Enzymes [BR:
ssn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SSON_0155 (pcnB)
Messenger RNA biogenesis [BR:
ssn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SSON_0155 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AAZ86948
ShiBASE_China:
SSO0155
UniProt:
Q3Z5L4
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All DBs
Position
complement(171926..173290)
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AA seq
454 aa
AA seq
DB search
MLSREESEAEQAVARPQVTVIPREQHAISRKDISENALKVMYRLNKAGYEAWLVGGGVRD
LLLGKKPKDFDVTTNATPEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNV
SDRTTSQRGQNGMLLRDNIFGSIEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGV
IRLIGNPETRYREDPVRMLRAVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESL
KLLQAGYGYETYKLLCEYHLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMR
VNPAFLFAAMFWYPLLETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTR
DIWQLQLRMSRRQGKRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAP
PDQKGMLNELDEEPSPRRRTRRPRKRAPRREGTA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgctaagccgcgaggaaagcgaggctgaacaggcagtcgcccgtccacaggtgacggtg
atcccgcgtgagcagcatgctatttcccgcaaagatatcagtgaaaatgccctgaaggta
atgtacaggctcaacaaagcgggatacgaagcctggctggttggcggcggcgtgcgcgac
ctgttacttggcaaaaagccgaaagattttgacgtaaccactaacgccacgcctgagcag
gtgcgcaaactgttccgtaactgccgcctggtgggtcgccgtttccgtctggctcatgta
atgtttggcccggagattatcgaagttgcgaccttccgtggacaccacgaaggtaacgtc
agcgaccgcacgacctcccaacgcgggcaaaacggcatgttgctgcgcgacaacattttc
ggctccatcgaagaagacgcccagcgccgcgatttcactatcaacagcctctattacagc
gtagcggattttaccgtccgtgattacgttggcggtatgaaggatctgaaggacggcgtt
atccgtctgattggtaacccggaaacgcgctaccgtgaagatccggtacggatgctgcgc
gcggtacgttttgccgccaaattgggtatgcgcatcagcccggaaaccgcagaaccgatc
cctcgcctcgctaccctgctgaacgatatcccaccggcacgcctgtttgaagaatcgctt
aaactgctacaagcgggctacggttacgaaacctataagctgttgtgtgaatatcatctg
ttccagccgctgttcccgaccattacccgctacttcacggaaaatggcgacagcccgatg
gagcggatcattgaacaggtgctgaagaataccgatacgcgtatccataacgatatgcgc
gtgaacccggcgttcttgtttgccgccatgttctggtacccactgctggagacggcacag
aagatcgcccaggaaagcggcctgacctatcacgacgctttcgcgctggcgatgaacgac
gtgctggacgaagcctgccgttcactggcaatcccgaaacgcctgacgacgttaacccgc
gatatctggcagttgcagttgcgtatgtcccgacgtcagggtaaacgcgcatggaaactg
ctggagcatcctaagttccgtgcggcttatgacctgttggccttgcgagctgaagttgaa
cgtaacgctgaactgcagcgtctggtgaaatggtggggtgagttccaggtttccgcgcca
ccagatcaaaaagggatgcttaacgagttggatgaagagccgtcaccgcgtcgccgtact
cgtcgtccacgcaaacgcgcaccgcgtcgtgagggtaccgcatga
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