Shigella sonnei Ss046: SSON_0159
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Entry
SSON_0159 CDS
T00274
Symbol
yadP
Name
(GenBank) conserved hypothetical protein
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssn03016
]
SSON_0159 (yadP)
Enzymes [BR:
ssn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SSON_0159 (yadP)
Transfer RNA biogenesis [BR:
ssn03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SSON_0159 (yadP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AAZ86952
ShiBASE_China:
SSO0159
UniProt:
Q3Z5L0
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All DBs
Position
complement(175698..176237)
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AA seq
179 aa
AA seq
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MPHMSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHLTLAFLGEVSAEKE
KALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQ
SNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcacatgtctgaaccgcaacgtctgttctttgctatcgacttacctgcagaaatc
cgcgaacagattatccactggcgcgccacacacttcccacctgaggcgggacgtccggtc
gccgccgataatttgcatctgactctggcatttttaggcgaagtgagcgccgagaaagag
aaggcgctttctcttttagccggacggattcgtcaacctggtttcacactcacgcttgat
gacgccggacaatggctgcgttcgcgtgtggtgtggttagggatgcgtcagccgccacgc
ggcttaatccagctggcgaatatgctccgttcacaggctgcccgcagcggttgttttcaa
agcaatcgtccgtttcatccacatattaccttattgcgcgacgccagcgaggcggtgaca
atcccgccgccaggttttaactggtcttatgcggtgacggagttcaccctttacgcctcc
tcgtttgcccgtggacgcacacgctacacgccgctaaaacgctgggcgctaacgcaataa
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