Shigella sonnei Ss046: SSON_0199
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Entry
SSON_0199 CDS
T00274
Symbol
ldcC
Name
(GenBank) lysine decarboxylase 2, constitutive
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00310
Lysine degradation
ssn01100
Metabolic pathways
ssn01110
Biosynthesis of secondary metabolites
ssn01120
Microbial metabolism in diverse environments
Module
ssn_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
SSON_0199 (ldcC)
Enzymes [BR:
ssn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
SSON_0199 (ldcC)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AAZ86991
ShiBASE_China:
SSO0199
UniProt:
Q3Z5H1
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Position
226039..228180
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AA seq
713 aa
AA seq
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MNIIAIMGPHGVFYKDEPIKELESALVAQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWD
EYSLDLCSDINQLNEYLPLYAFINTHSTMDVSVQDMRMALWFFEYALGQAEDIAIRMRQY
TNEYLDNITPPFTKALFTYVKERKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADV
SISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPSGSTLLI
DRNCHKSLAHLLMMNDVVPVWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVH
AVITNSTYDGLLYNTDWIKQTLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVAGKVIF
ETQSTHKMLAALSQASLIHIKGEYDEEAFNEAFMMHTTTSPSYPIVASVEMAAAMLRGNP
GKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPPQVDEAECWPVAPGEQWHGFNDAD
ADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIG
IDKTKAMGLLRGLTEFKRSYDLNLRIKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRKH
DLPGLMLRAFDTLPEMIMTPHQAWQRQIKGEVETIALEQLVGRVSANMILPYPPGVPLLM
PGEMLTKESRTVLDFLLMLCSVGQHYPGFETDIHGAKQDEDGVYRVRVLKMAG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcattgccattatgggaccgcatggcgtcttttataaagatgagcccatcaaa
gaactggagtcggcgctggtggcgcaaggctttcagattatctggccacaaaacagcgtt
gatttgctgaaatttatcgaacataaccctcgaatttgtggcgtgatttttgactgggat
gagtacagtctcgatttatgcagcgatatcaatcaacttaatgaatatctcccgctttat
gccttcatcaacacccactcgacgatggatgtcagcgtgcaggatatgcggatggcgctc
tggttttttgaatatgcgctggggcaggcggaagatatcgccattcgtatgcgtcagtac
accaacgaatatcttgataacattacgccgccgttcacgaaagccttgtttacctacgtc
aaagagcggaagtacaccttttgtacgccggggcatatgggcggcaccgcatatcaaaaa
agcccggttggctgcctgttttatgattttttcggcgggaataccctcaaggctgatgtc
tctatttcggtcaccgagcttggttcgttgctcgaccacaccgggccacacctggaagcg
gaagagtacatcgcgcggacttttggcgcggaacagagttatatcgttaccaacggaaca
tcgacgtcgaacaaaattgtgggtatgtacgccgcgccatccggcagtacgctgttgatc
gaccgcaattgtcataaatcgctggcgcatctgttgatgatgaacgatgtagtgccagtc
tggctgaaaccgacgcgtaatgcgttggggattcttggtgggatcccgcgccgtgaattt
actcgcgacagcatcgaagagaaagtcgctgccaccacgcaggcacaatggccggttcat
gcggtgattaccaactccacctatgatggcttgctctacaacaccgactggatcaaacag
acgctggatgtcccgtcgatccacttcgattccgcctgggtgccgtacacccattttcat
ccgatctaccaggggaaaagtggtatgagcggcgagcgtgttgcgggaaaagtgatcttc
gaaacgcaatcgacccacaaaatgctggcggcgttatcgcaggcttcgctgatccacatt
aaaggcgagtatgacgaagaggcgtttaacgaagcctttatgatgcataccaccacctcg
cccagttatcccattgttgcttcggttgagatggcggcggcgatgctgcgtggtaatccg
ggcaaacggctgattaaccgttcggtggagcgggcgctgcattttcgcaaagaggtccag
cggttgcgggaagagtctgacggttggtttttcgatatctggcaaccgccgcaggtggat
gaagccgaatgctggcccgttgcgccaggcgaacagtggcacggctttaacgatgcggat
gccgatcatatgtttctcgatccggttaaagtcactattttgacaccggggatggacgaa
cagggcaatatgagcgaggaggggatcccggcggcgctggtggcaaaattcctcgacgaa
cgtgggatcgtagtagagaaaaccggcccttataacctgctgtttctctttagtattggt
atcgataaaaccaaagcaatgggattattgcgtgggttgacggaatttaaacgctcttac
gatctcaacctgcggatcaaaaatatgctacccgatctctatgctgaagatcccgatttc
taccgcaatatgcgtattcaggatctggcgcaagggatccataagctgattcgtaaacac
gatcttcccggtttgatgttgcgggcattcgatactttgccggaaatgatcatgacgcca
catcaggcatggcagagacagattaaaggtgaagtagaaaccattgcgctggaacaactg
gtcggtagagtatcggcaaatatgatcctgccttatccaccgggcgtaccgctgttgatg
ccaggagaaatgctgaccaaagagagccgcacggtactcgattttctactgatgctttgt
tccgtagggcaacattaccccggttttgaaacggatattcacggcgcgaaacaggacgaa
gacggcgtttaccgcgtacgagtcctaaaaatggcgggataa
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