Shigella sonnei Ss046: SSON_0457
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Entry
SSON_0457 CDS
T00274
Symbol
dnaX
Name
(GenBank) DNA polymerase III tau and gamma subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn03030
DNA replication
ssn03430
Mismatch repair
ssn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSON_0457 (dnaX)
03430 Mismatch repair
SSON_0457 (dnaX)
03440 Homologous recombination
SSON_0457 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssn03032
]
SSON_0457 (dnaX)
03400 DNA repair and recombination proteins [BR:
ssn03400
]
SSON_0457 (dnaX)
Enzymes [BR:
ssn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SSON_0457 (dnaX)
DNA replication proteins [BR:
ssn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SSON_0457 (dnaX)
DNA repair and recombination proteins [BR:
ssn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SSON_0457 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_18
ResIII
AAA_14
AAA_2
AAA_7
PIF1
TsaE
AAA_assoc_2
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AAZ87233
ShiBASE_China:
SSO0457
UniProt:
Q3Z4S9
LinkDB
All DBs
Position
484286..486211
Genome browser
AA seq
641 aa
AA seq
DB search
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASGDGQVSTQAVSAM
LGTLDDDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA
ALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALAFH
PRMPLPEPEVPRQSFAPVVPTAVMTPTQVPPQSAPQQAPTVPLPETTSQVLAARQQLQCV
QGATKAKKSESAAATRARPVNNAALERLASVTDRVQARPVPSALEKASAKKEAYRWKATT
PVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALN
AWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSMLKGSTVELTIVEDDNPAVRTPLEW
RQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtcttagcccgaaaatggcgcccacaaacctttgctgacgtcgtcggc
caggaacatgtgctgaccgcactggcgaacggcttgtcgttagggcgtattcatcatgct
tatcttttttccggcacccgtggcgtcggaaaaacctctatcgcccgactgctggcgaag
gggctaaactgcgaaaccggcattaccgcgacgccgtgcggcgtgtgcgataactgtcgt
gaaatcgagcaggggcgctttgtcgatctgattgaaatcgacgccgcctcgcgcaccaaa
gttgaagatacccgcgacctgctggataacgtccagtacgctccggcgcgtggtcgtttc
aaagtttatctgatcgacgaagtgcatatgctgtcgcgccacagctttaacgcactgtta
aaaacccttgaagagccgccggagcacgttaagtttctgctggcgacgaccgatccacag
aaattgccggtgacgattttgtcgcgctgtttgcaatttcatctcaaggcgctggatgtc
gagcaaattcgccatcaacttgagcacatcctcaacgaagaacatatcgctcacgagccg
cgggcgttgcaattgctggcgcgcgccgctgaaggcagcctgcgagatgccttaagtctg
accgaccaggcgattgccagcggtgacggccaggtttcaacccaggcagtcagtgcgatg
ctgggtacgcttgatgacgatcaggcgctgtcgctggttgaagcgatggtcgaggccaac
ggcgagcgcgtaatggcgctgattaatgaagccgctgcccgtggtatcgagtgggaagcg
ttgctggtggaaatgctcggcctgttgcatcgtattgcgatggtacaactttcgcctgct
gcacttggcaacgacatggccgccattgagctgcggatgcgtgaactggcgcgcaccata
ccgccgacggatattcagctttactatcagacgctgttgattggtcgcaaagaattaccg
tatgcgccggaccgccgcatgggcgttgagatgacgctgctgcgcgcgctggcgttccat
ccgcgtatgccgctgcctgagccagaagtgccacgccagtcctttgcacccgtcgtgcca
acggcagtaatgacgccaacccaggtgccgccgcaatcagcgccgcagcaggcaccgact
gtaccgctcccggaaaccaccagccaggtgctggcggcgcgccagcagttgcagtgcgtg
cagggagcaaccaaagcaaaaaagagtgaatcggcagccgctacccgcgcgcggccggtg
aataacgctgcgctggaaagactggcttcggtcaccgatcgcgttcaggcgcgtccggtg
ccatcggcgctggaaaaagcgtcagccaaaaaagaagcgtatcgctggaaggcgaccact
ccggtgatgcagcaaaaagaagtggtcgccacgccgaaggcgctgaaaaaagcgctggaa
catgaaaaaacgccggaactggcggcgaagctagcggcagaagccattgagcgcgacccg
tgggcggcacaggtgagccaactttcgctaccaaaactggtcgaacaggtggcgttaaat
gcctggaaagaggagagcgacaacgcagtatgtctgcatttgcgctcctctcagcggcat
ttgaacaaccgcggtgcacagcaaaaactggctgaagcgttgagcatgttaaaaggttca
acggttgaactgactatcgttgaagatgataatcccgcggtgcgtacgccgctggagtgg
cgtcaggcgatatacgaagaaaaacttgcgcaggcgcgcgagtccattattgcggataat
aatattcagaccctgcgtcggtttttcgatgcggagctggatgaagaaagtatccgcccc
atttga
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