Shigella sonnei Ss046: SSON_0486
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Entry
SSON_0486 CDS
T00274
Symbol
ybbB
Name
(GenBank) putative capsule anchoring protein
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssn03016
]
SSON_0486 (ybbB)
Enzymes [BR:
ssn01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
SSON_0486 (ybbB)
Transfer RNA biogenesis [BR:
ssn03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SSON_0486 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
T2SSE
AAA_16
AAA_18
AAA_23
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AAZ87262
ShiBASE_China:
SSO0486
UniProt:
Q3Z4Q0
LinkDB
All DBs
Position
complement(516314..517408)
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AA seq
364 aa
AA seq
DB search
MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMNNDERAAVGTCYKQQGS
DAALALGHKLVAGEIRQQRMDAWRAACLQNPQGILCCARGGQRSHIVQSWLYAAGIDYPL
VEGGYKALRQAAIQATIELAQKPIVLIGGCTGSGKTLLVQQQPNGVDLEGLARHRGSAFG
RTLQPQLSQASFENLLAAEMLKTDARQDLRLWVLEDESRMIGSNHLPECLRERMTQAAIA
VVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQEYCEYLHHGLSAIKRRLGLQRYNE
LAAQLDTALTTQLTTDSTDGHLAWLVPLLKEYYDPMYRYQLEKKAEKVVFRGEWAEVAEW
VKTQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagagacacacggaacaggactatcgtgccctgctgattgctgatacgcccatt
attgatgttcgcgcccctatcgagtttgagcaaggcgcaatgcccgccgctatcaacctg
ccgttaatgaataacgatgaacgcgccgccgttggcacttgttataaacagcaaggctca
gacgcggcgctggcgctggggcataaactggtggcgggtgaaattcgtcagcagcgcatg
gacgcctggcgggcagcgtgcctgcaaaatccgcaaggtattctctgctgcgcccgtggc
ggtcagcgctcacatattgtgcaaagctggttgtatgcagcggggattgattatccgctg
gtggaaggcggttataaggcactgcgccaagccgcgattcaggcgactattgaactggca
caaaaaccgatagtgctgattggcggttgtaccggcagcggtaaaacgctgttagtgcag
caacagccgaacggtgttgatctggaagggttagcgcgtcatcgcggttcggcgtttggt
cgcaccttacaaccacaacttagccaggcgagttttgaaaacctgctggctgccgaaatg
ctaaaaaccgacgcccgtcaggatttgcgcctgtgggtgctggaagacgaaagccggatg
atcggttcgaatcacctgccggaatgcctgcgcgagcgaatgactcaggcggcgattgcg
gtggtagaagatccgtttgagatccgtcttgagcgcctgaacgaagagtatttcttgcgt
atgcatcatgattttacccacgcgtacggcgacgaacagggctggcaggaatattgcgaa
tacctgcatcacggactttcggctattaagcgtcggctggggttacagcgctataacgaa
ctcgctgcccagctggatacggcgctgacaacgcaactcaccaccgacagcaccgacggt
catctggcctggctggtgccgttacttaaagaatattacgacccgatgtatcgctatcag
cttgagaaaaaagcggaaaaagttgtctttcgcggtgagtgggcggaagtggcggaatgg
gttaagacgcagtga
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