Shigella sonnei Ss046: SSON_0517
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Entry
SSON_0517 CDS
T00274
Name
(GenBank) rhs core protein with extension
Organism
ssn
Shigella sonnei Ss046
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
DUF4595
BA14K
Motif
Other DBs
NCBI-ProteinID:
AAZ87286
ShiBASE_China:
SSO0517
UniProt:
Q3Z4M6
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Position
complement(546074..549505)
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AA seq
1143 aa
AA seq
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MLGKTGKSLKSIANKVIRWVTDPVDPVTGAYCDERTDFTLGQTLPLSFTRFHSSVLPLHG
LTGVGWSDSWSEYAWVREQGNRVDIISQGATLRFAFDGDSDTAVNPYHAQYILRRRDDYL
ELFDRDALSSRFFYDAFPGMRLRHPVTDDTSDDRLAHSPNDRMYMLGGMSDTASNRITFE
RDSQYRITGVSHTDGIRLKLTYHASGYLKAIHRTDNDIQTLATYEQDARGRLTEADARLD
YHLFYEYDAADRIIRWSDNDQTWSRFTYDEQGRCVNVTGAEGYYNATLDYGDGCTTVTDG
KGIHRYYYDPDGNILREEAPDGSTTMYEWDEFHHLLARHSPAGRVEKFEYNAAHGQLSRY
TAADGAEWQYRYDERGLLSNITDPAGQTWTQQCDERGLPVSLVSPQGEETRLAYTAQGLL
SGIFRQDERRLGIEYDHHNRPETLTDVMGREHHTEYSGHDLPVKMRGPGGQSVRLQWQQH
HKLSGIERAGTGAEGFRYDRHGNLLAWTDGNGVVWTMEYGPFDFPVARTDGEGHRWQYRY
DKDTLQLTEVINPQGESYLYVLDNCGRVTEERDWGGVVWRYRYDADGLCTAKVNGLEETI
LYSRDAAGRLAEIISPEGKTQYAYDKSGRLTGIFSPDGTSQRTGYDERGRVNVTTQGRRA
IEYNYPDEHTVIRCILPPEDERDRHPGESLLKTTYRYNAAGELTEVILPGDETLTFSRDE
AGREVLRHSNRGFACEQGWNAAGQPVSQRAGFFPAEATWDGLVPSLVREYRYDSAGNVSG
VTSREDYGRETRREYRLDRNGQVTAVTASGTGLGYGEGDESYGYDSCGYLKAQSAGRHRI
SEETDQYAGGHRLKQAGNTQYDYDAAGRMVSRTRHRDGYRPETERFRWDSRDQLTGYCSA
QGELWEYRHDASGRRTEKRCDRKKIRFTYLWDGDSIAEIREYRDDKLYSVRHLVFNGFEL
ISQQFSRVRQAHPSVAPQWVTRTNHAVSDLTGRPLMLFNSEGKTVWRPGQTSLWGLALSL
PADTGYPDPRGELDPEADPGLLYAGQWQDAESGLCYNRFRYYEPETGMYLVSDPLGLQGG
EQTYRYVPNPCGWVDPLGLAASSKISSLMDYIGDGRRVSGHTGFLDGVRLSRSQINKVML
PTY
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
ttgctggggaaaacaggtaagtcgttaaaaagtattgccaataaagtcatcagatgggta
acagatcctgtcgatccggtaaccggcgcatactgcgacgaacgtaccgacttcaccctg
ggccagaccctccccctctccttcacccgtttccacagttctgtactgccgctgcatggc
ctgaccggcgtgggctggagcgactcctggagcgaatacgcctgggtgcgtgaacaggga
aaccgggtggatatcatcagccagggagccacgctgagatttgccttcgacggtgacagt
gatacggcggttaacccgtatcacgcccagtacattctgcgccgccgcgatgattatctg
gagctgttcgacagggatgcactgagcagccgcttcttttatgacgcctttccgggaatg
cgtctgcgccacccggtgactgacgataccagcgatgaccgcctggcacacagccccaat
gaccggatgtacatgctgggcgggatgagcgacaccgccagcaaccgcatcacgtttgag
cgcgacagccagtaccggatcacgggtgtcagtcacaccgacgggatccggcttaaactg
acgtaccacgccagcggctacctgaaagccattcaccgcacggataacgacatacagacg
ctggcgacctacgaacaggatgcgcgggggcggctgacagaagcggatgcgcggctggac
taccacctgttttatgagtacgacgctgcggaccggatcatccgctggtccgataacgac
cagacgtggagccgtttcacctacgatgaacagggccggtgcgtgaatgtcaccggggcg
gagggctattacaacgccacgctggactatggtgacggctgcaccaccgtgacggacggc
aagggcattcaccgttattactatgatcctgacggcaatattctgcgggaagaagcgccg
gacggcagcaccaccatgtatgaatgggatgaattccatcacctgctggcccgccactcc
cctgccgggcgggtggagaaatttgaatacaacgccgcacacggtcagttaagccgttac
acggcggcagacggcgcggagtggcagtaccgctatgatgagcgcggcctgctcagcaac
atcaccgaccctgccgggcagacgtggacacagcagtgtgatgaacgcggcctgccggta
agtctggtgtcgccacagggcgaagagacccggctggcatacaccgctcaggggctgctg
tcgggaatattccgccaggatgaacggcgtctgggcatagagtacgaccaccacaaccgg
ccggaaacactcaccgacgtgatgggccgtgaacaccacaccgaatacagcggtcacgac
ctgccagtgaagatgcgcggccccggcggtcagtcagtgcggttacagtggcagcagcac
cataaactgagcggcattgaacgtgctggaaccggcgcggaaggatttcgctatgaccgc
cacggcaacctgctggcctggacggacggcaacggtgttgtctggacgatggaatacggt
ccgttcgattttccggtggcgcgaacggacggtgaaggccaccgctggcagtaccgctac
gataaagacacactgcaactgacagaagtcatcaacccgcagggtgagtcatatctttat
gttctggataactgcggccgggtgacggaagagcgtgactggggcggcgtggtctggcgt
taccgctatgacgccgatggcctctgtaccgccaaggttaacggcctggaggaaaccatc
ctctacagccgggacgccgcaggccgcctggcagaaatcatctcgccggaaggcaaaacg
cagtatgcctatgacaaatccggcaggctgacgggtatcttcagcccggacggcacatca
cagcgcaccggctatgacgaacgcgggcgggtgaatgtcaccactcagggccgacgggcc
attgaatacaactaccccgatgaacacaccgtcatccgctgtatcctgccaccggaagat
gaacgcgacagacaccccggtgaatccctgctgaaaaccacgtaccgctacaacgccgcc
ggagaactgacagaggtcattctgccgggggatgagacgctgacgttcagccgtgatgag
gcgggacgtgaagtgctccggcacagtaaccggggttttgcctgtgaacagggctggaat
gcagccggtcagcctgtcagtcagcgcgccggattttttccggcagaagccacatgggac
gggctggttccctcactggtacgggagtaccgttacgacagcgcgggtaacgtgtcaggc
gtcaccagccgggaagattacggacgggaaacacggcgggagtatcggctggaccggaac
ggccaggtcacggcggtgacagcctcaggcaccgggctgggctatggcgaaggcgatgag
tcctatggctatgacagctgcggctacctgaaggcgcagtctgcgggcaggcaccggata
agtgaagagactgaccagtatgccggaggccaccggctgaaacaggccggaaacacgcag
tatgactatgacgccgcaggccggatggtcagccgcaccagacaccgtgacggctaccga
ccggaaacagagcggttccggtgggacagccgggaccagctgaccgggtattgcagcgca
cagggtgagctgtgggaataccgccacgacgccagcggcagacgaacagagaaacgctgc
gaccggaagaaaatccgcttcacgtatctgtgggacggcgacagtattgcggaaatccgg
gaataccgcgatgataaactgtacagcgtaaggcacctggtgtttaacggctttgagctg
ataagccagcagttcagccgggtacggcaggcgcatccgtcggtggccccgcagtgggtg
acgcggacgaatcatgcggtgagcgacctgacgggccgcccgctgatgctctttaacagt
gaaggaaagacggtctggcgaccggggcagaccagcctgtgggggctggcactcagcctg
cccgcagacaccggctacccggacccgcgcggggaactggacccggaagccgaccccggc
ctgctgtatgcaggacagtggcaggatgcggaatccgggctgtgctataatcggttccgg
tattacgagccggaaaccggaatgtacctggtgagtgatccgctggggttgcagggcggg
gagcagacttaccggtatgtgccgaatccttgtgggtgggttgatccgctgggattggct
gcaagttctaaaatcagcagtttgatggactatattggcgatggtcgtcgtgttagtggg
catacgggtttcctggatggggttcgtttatcacgtagtcaaataaacaaggtgatgctg
ccaacttactga
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integrated database retrieval system
