Shigella sonnei Ss046: SSON_0563
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Entry
SSON_0563 CDS
T00274
Symbol
rna
Name
(GenBank) RNase I
KO
K01169
ribonuclease I (enterobacter ribonuclease) [EC:
4.6.1.21
]
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssn03016
]
SSON_0563 (rna)
Enzymes [BR:
ssn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.21 Enterobacter ribonuclease
SSON_0563 (rna)
Transfer RNA biogenesis [BR:
ssn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SSON_0563 (rna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_T2
Motif
Other DBs
NCBI-ProteinID:
AAZ87330
ShiBASE_China:
SSO0563
UniProt:
Q3Z4I2
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All DBs
Position
complement(603200..604006)
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AA seq
268 aa
AA seq
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MKAFWRNAALLAVSLLPFSSANAVALQAKQYGDFDRYVLALSWQTGFCQSQHDRNRNERD
ECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFGCATRPIPNLPEAHASRMC
SSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACFGFDPDAYFGTMVRLNQEIKE
SEAGKFLADNYGKTVSRRDFDAAFAKSWGKENVKAVKLTCQGNPAYLTEIQISIKADAIN
APLSANSFLPQPHPGNCGKNFVIDKVGY
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattctggcgtaacgccgcgttgctcgcggtttctctgcttcccttctcttct
gccaacgccgtagcgttgcaggcaaaacagtatggcgattttgatcgctatgtcctggcc
ctctcctggcaaaccggattttgccagagtcaacacgatcgaaatcgtaacgaacgagat
gaatgtcgcctacaaaccgaaacgaccaacaaagctgattttctgaccgtacatggtctg
tggccaggattgcctaaatcggttgctgcccgtggtgttgatgaacgccgctggatgcgc
ttcggttgcgctactcgcccaatcccgaatctaccagaagcgcacgccagccggatgtgt
tcatcgccggaaaccgggttatcactggaaacggccgctaaactaagtgaagtcatgcca
ggagctggcggacgttcctgcctggaacgctacgaatatgccaaacacggtgcctgcttt
ggttttgatccggacgcatacttcggtacgatggtacgcctgaatcaagaaattaaagag
agcgaagccggaaaattccttgcggataattacggtaaaacagtgagccgccgtgacttt
gacgccgcctttgccaaaagctggggaaaagagaacgtgaaagcagttaagctaacgtgc
cagggtaaccctgcgtatttgactgaaattcagatctcgatcaaagctgacgccatcaac
gctccgctttctgcaaactcattcttgccacaaccacacccaggcaactgtggcaaaaac
tttgtgattgataaagtgggttattaa
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