Shigella sonnei Ss046: SSON_0681
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Entry
SSON_0681 CDS
T00274
Symbol
farR
Name
(GenBank) transcriptional regulator of succinylCoA synthetase operon
KO
K11922
GntR family transcriptional regulator, mannosyl-D-glycerate transport/metabolism system repressor
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssn03000
]
SSON_0681 (farR)
Transcription factors [BR:
ssn03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SSON_0681 (farR)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
DnaD_N
HTH_DeoR
DUF6070
HTH_11
HTH_Crp_2
Rrf2
HTH_41
HTH_20
HTH_CodY
Motif
Other DBs
NCBI-ProteinID:
AAZ87438
ShiBASE_China:
SSO0681
UniProt:
Q3Z474
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Position
complement(725661..726383)
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AA seq
240 aa
AA seq
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MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRVTVRQALRQLVEQQILE
SIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEILIFEVIPADDFLQQQLQITAQ
DRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENSKYHFIEEVKKMVIDRSEQEI
IPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEYSRNAFNTDDYKFTLIAQRKSSR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggacacaagcccttataccggcagattgccgatcgcattcgtgaacaaattgcgcgt
ggcgagcttaaacctggcgatgcgttacccactgaatcagcgctacaaacagagtttggc
gtcagccgggttacggtgcgtcaggctttgcgccagctagtcgagcagcagatcctcgaa
agcattcagggcagcgggacttacgtcaaagaagagcgggtcaattacgatatttttcag
ttaaccagttttgatgaaaaactgtcggaccgtcacgtcgatacacacagtgaaatcctg
atatttgaagtgattccggctgacgattttcttcagcaacagctacaaatcaccgcgcag
gatcgtgtgtggcatgtgaagcgcgtgcgctatcgcaagcaaaagccaatggcgctggaa
gaaacctggatgccgcttgcgttgttcccggatctcacctggcaggtcatggaaaattcg
aaatatcactttattgaagaagtgaagaagatggttatcgatcgtagcgaacaggaaatc
attcctctgatgccaaccgaagagatgagccgtctgcttaatatcagccagacaaagccg
attcttgaaaaagtatcgcgtggatatttagttgatggtcgggtgtttgaatatagccgc
aacgcttttaataccgatgactataaatttaccctgatagcgcagcgaaaatcatcgcga
taa
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