Shigella sonnei Ss046: SSON_1033
Help
Entry
SSON_1033 CDS
T00274
Symbol
ycdC
Name
(GenBank) putative tet operon regulator
KO
K09017
TetR/AcrR family transcriptional regulator
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssn03000
]
SSON_1033 (ycdC)
Transcription factors [BR:
ssn03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SSON_1033 (ycdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_3
TetR_N
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
AAZ87761
ShiBASE_China:
SSO1033
UniProt:
Q3Z3A1
LinkDB
All DBs
Position
1111719..1112357
Genome browser
AA seq
212 aa
AA seq
DB search
MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQIAELAGVSKTNLLYYFP
SKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKLEVSRDYPQASRLFCMEML
AGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQHLIFMIWASTQHYADFAPQV
EAVTGATLRDEIFFNQTVENVQRIIIEGIRPR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaggcgcagtgaaaacaacgggtaaacgttcgcgcgcagtaagcgcgaagaaa
aaagcgattcttagcgcagcactggacactttttcacaattcggttttcacggcacaagg
ctggagcagatcgcagagttggcgggtgtttcaaaaaccaatctgctgtattactttccg
tcaaaagaggcgctgtatattgccgtgctgcggcagattctcgatatctggctggcaccg
ttaaaagcgtttcgtgaagatttcgctccgctggcggcgataaaagagtacatccgtctg
aagctggaagtctcccgcgattatccgcaggcttcgcgcctgttctgtatggagatgctg
gcaggcgcgccgctgttaatggatgaactgacgggcgatttgaaggcattaattgatgag
aaatctgcgctgattgccggttgggtcaaaagcggcaaactcgcgccgattgatccgcag
catttgattttcatgatttgggcttccactcaacattacgccgatttcgcccctcaggtg
gaggcggtgacaggcgcgacgttgcgcgatgagatatttttcaatcaaacggttgaaaac
gtgcagcggattattattgaggggattcgaccacgttaa
DBGET
integrated database retrieval system
