Shigella sonnei Ss046: SSON_1131
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Entry
SSON_1131 CDS
T00274
Symbol
ycfQ
Name
(GenBank) conserved hypothetical protein
KO
K22041
TetR/AcrR family transcriptional regulator, copper-responsive repressor
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssn03000
]
SSON_1131 (ycfQ)
Transcription factors [BR:
ssn03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SSON_1131 (ycfQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_13_2
TetR_C_11
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
AAZ87856
ShiBASE_China:
SSO1131
UniProt:
Q3Z306
LinkDB
All DBs
Position
complement(1209516..1210226)
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AA seq
236 aa
AA seq
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MGSGLVNGGDYFYNNLSFTVTRFNGIMATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQ
HGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVE
SALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQ
RQARGEIPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgggatctggactggtgaacggaggtgattatttttataataacctttcattcacagtc
accaggttcaacggcatcatggcaactgactcaacacaatgtgtaaaaaaaagccgtggc
cgcccaaaagtgttcgacagggatgccgcgcttgataaggccatgaaattgttctggcaa
cacggttatgaagcgacttctcttgcggacctcgtcgaagcgaccggagccaaagcgccc
acgctatacgcggaatttaccaacaaagaggggttatttcgtgccgttctcgaccgctat
atcgatcgttttgccgctaagcatgaagcacagctgttttgtgaagagaaaagcgtggag
tctgcgctggctgactattttgctgccatcgccaactgctttaccagcaaagacaccccg
gcaggctgcttcatgatcaacaactgcaccaccctctccccagattcaggagatatcgcc
aatacgttgaaatcacgccatgcgatgcaagagcgcactttgcagcagtttttatgtcaa
cgacaagcgcgcggggaaatcccgacccactgtgacgtgacacatctggcagaattcctt
aattgtattattcaggggatgtcgatcagcgcacgcgaaggtgcatcgctggaaaaactg
atgcagattgccggaacgactttgcgtttatggcccgaactggtgaaataa
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