Shigella sonnei Ss046: SSON_1151
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Entry
SSON_1151 CDS
T00274
Symbol
ycfB
Name
(GenBank) conserved hypothetical protein
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SSON_1151 (ycfB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssn03016
]
SSON_1151 (ycfB)
Enzymes [BR:
ssn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
SSON_1151 (ycfB)
Transfer RNA biogenesis [BR:
ssn03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SSON_1151 (ycfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
Asn_synthase
DUF7411
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AAZ87876
ShiBASE_China:
SSO1151
UniProt:
Q3Z2Y6
LinkDB
All DBs
Position
complement(1232690..1233841)
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AA seq
383 aa
AA seq
DB search
MIEYAALKFNVVSDPMSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDG
EEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKE
IKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQ
SLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPGQPGKIITVD
GDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSV
GLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQS
AVFYNGEVCLGGGIIEQRLPLPV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
gtgatagaatacgccgccttgaagttcaatgtcgtgagtgatccaatgtctgaaaccgca
aaaaaagtaatcgtcggcatgtccggcggtgtcgattcctccgtttctgcctggctgttg
caacaacagggatatcaggttgaaggcctgtttatgaagaactgggaagaagacgacggt
gaggaatattgcacagcggcagcggatctggctgatgcccaggctgtctgcgacaagctc
ggcattgaactgcacaccgttaactttgctgccgagtactgggacaatgtcttcgaactg
ttccttgccgaatataaagccggtcgcacgccgaatccggatattctgtgcaacaaagag
atcaaatttaaagctttcctcgaatttgccgccgaagatttaggtgccgattatatcgct
accggtcattacgtacgtcgggccgatgtcgatggcaagagccgcctgctgcgtggtctg
gacagcaataaagaccagagctacttcctttatacgctcagccatgagcagattgcgcaa
agcctgttcccggtcggcgaactggaaaaaccgcaggtgcgtaagattgctgaagatctt
ggtctggtcaccgcgaagaaaaaagactctaccggcatttgcttcattggcgaacgtaaa
ttccgcgagttcctgggccgttatctcccggggcaaccgggcaaaatcattaccgtcgat
ggcgatgaaattggtgagcaccaggggctgatgtatcacactctcggtcagcgtaaaggt
ctgggtatcggtggcaccaaagaaggcaccgaagaaccttggtatgtggtggacaaagac
gtcgaaaacaacattctggttgtcgctcagggccatgaacacccgcggctgatgtctgtc
gggttgattgcccagcagttgcactgggtcgatcgcgaaccattcaccggcactatgcgt
tgcacggtaaaaacccgctatcgccagaccgatatcccttgcaccgtcaaggcgctggac
gatgatcgcattgaagtgattttcgatgaaccggttgccgccgtgacgccgggccagtct
gccgtcttctataacggtgaagtgtgcctcggtggcggtattattgagcagcgtctgccg
ctgccggtctga
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