Shigella sonnei Ss046: SSON_1153
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Entry
SSON_1153 CDS
T00274
Symbol
ymfC
Name
(GenBank) conserved hypothetical protein
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssn03009
]
SSON_1153 (ymfC)
Enzymes [BR:
ssn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
SSON_1153 (ymfC)
Ribosome biogenesis [BR:
ssn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SSON_1153 (ymfC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF8729
Cyc-maltodext_C
Motif
Other DBs
NCBI-ProteinID:
AAZ87878
ShiBASE_China:
SSO1153
UniProt:
Q3Z2Y4
LinkDB
All DBs
Position
complement(1234321..1234944)
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AA seq
207 aa
AA seq
DB search
MQKTSFRNHQVKRFSSQRSTRRKPENQPTRVILFNKPYDVLPQFTDEAGRKTLKEFIPVQ
GVYAAGRLDRDTEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQDALEALRNGVT
LNDGPTLPAGAELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQVRRMTAHVGFP
TLRLIRYAMGDYTLDNLANGEWREATE
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaacttcttttagaaatcaccaggttaagcgattcagctcgcaacgttctact
aggcgtaaacctgaaaaccagcccacgcgtgtgatcctgttcaataaaccctacgatgtt
cttccgcagttcaccgatgaagccggacgcaaaacattaaaagaattcatcccggttcag
ggcgtttatgcagcaggtcgtcttgaccgcgataccgaagggttactggtgctgaccaat
aacggcgcgttgcaggcgcgtttaacccagccgggcaaacgcaccgggaaaatctattat
gtgcaggtggaaggtattcccacacaagacgcacttgaagccttgcgcaatggcgtaacc
ttaaatgatggccctaccctgcccgccggcgcggagctggttgacgaaccagcgtggtta
tggccgcggaatccaccaattcgtgaacgcaaaagtattcccaccagctggctgaagatc
accttatatgaaggacgtaatcgccaggtgcgccgcatgaccgcccatgttggtttcccc
acgctgcgactgattcgttatgcgatgggtgattacactttggataaccttgccaatggc
gaatggcgagaagcaacagaataa
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