Shigella sonnei Ss046: SSON_1194
Help
Entry
SSON_1194 CDS
T00274
Symbol
fliA
Name
(GenBank) alternative sigma factor 28
KO
K02405
RNA polymerase sigma factor FliA
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn02020
Two-component system
ssn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SSON_1194 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SSON_1194 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssn03021
]
SSON_1194 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ssn02035
]
SSON_1194 (fliA)
Transcription machinery [BR:
ssn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SSON_1194 (fliA)
Bacterial motility proteins [BR:
ssn02035
]
Flagellar system
Flagellar assembly proteins
Stator
SSON_1194 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
UPF0147
UPF0122
TFIIE_alpha
SapB_1
Motif
Other DBs
NCBI-ProteinID:
AAZ87915
ShiBASE_China:
SSO1194
UniProt:
Q3Z2U7
LinkDB
All DBs
Position
1273629..1274348
Genome browser
AA seq
239 aa
AA seq
DB search
MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQAIGQLEQELGRNATETEV
AERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELVTDDHQRENPLQQLLDSNLRQ
RVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGESRVSQLHSQAIKRLRTKLGKL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaattcactctataccgctgaaggtgtaatggataaacactcgctgtggcagcgttat
gtcccgctggtgcgtcacgaagcattgcgcctgcaggttcgactgcccgcgagcgtggaa
cttgacgatctgctacaggcgggcggcattgggttacttaatgccgtcgaacgctatgac
gccctacaaggaacggcatttacaacttacgcagtgcagcgtatccgtggcgctatgctg
gatgaacttcgcagccgtgactgggtgccgcgcagcgtgcgacgcaacgcgcgtgaagtg
gcacaggcaatagggcaactggagcaggaacttggccgcaacgccacggaaactgaggta
gcggaacgtttagggatcgatattgccgattatcgccaaatgttgctcgacaccaataac
agccagctcttctcctacgatgagtggcgcgaagagcacggcgatagcatcgaactggtt
actgatgatcatcagcgagaaaacccgctacaacaactgctggacagtaatctgcgccag
cgggtgatggaagccatcgaaacgttgccggagcgcgaaaaactggtattaaccctctat
taccaggaagagctgaatctcaaagagattggcgcggtgctggaggtcggggaatcgcgg
gtcagtcagttacacagccaggccattaaacggttacgcactaaactgggtaagttataa
DBGET
integrated database retrieval system
