Shigella sonnei Ss046: SSON_1278
Help
Entry
SSON_1278 CDS
T00274
Symbol
ruvC
Name
(GenBank) Holliday junction nuclease
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SSON_1278 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssn03400
]
SSON_1278 (ruvC)
Enzymes [BR:
ssn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
SSON_1278 (ruvC)
DNA repair and recombination proteins [BR:
ssn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SSON_1278 (ruvC)
RecFOR pathway proteins
SSON_1278 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
Motif
Other DBs
NCBI-ProteinID:
AAZ87991
ShiBASE_China:
SSO1278
UniProt:
Q3Z2M1
LinkDB
All DBs
Position
1353037..1353558
Genome browser
AA seq
173 aa
AA seq
DB search
MAIILGIDPGSRVIGYGVIRQVGRQLSYLGSGCIRTKVDDLPSRLKLIYAGVTEIITQFQ
PDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEYAARQVKQTVVGIGSAEKS
QVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQMSESRLNLARGRLR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggctattattctcggcattgacccgggttcgcgcgtgatcggctatggtgtcatccgc
caggtaggcaggcaactgtcctacctgggtagcggatgcatacgcaccaaagtggatgat
ttaccgtctcgtctgaagctcatctatgcgggcgtgacggaaatcatcacccagttccag
ccagattatttcgccattgaacaagtctttatggccaaaaatgccgactcggctctgaaa
ctggggcaggcgcgcggcgtggcgattgtggcggcggtgaatcaggaattgccggtattt
gaatacgcggcacgtcaggtaaagcaaacggtggtaggtattggtagtgccgaaaaaagc
caggtgcagcatatggtccgcaccttgctgaaactgcccgctaatccacaggcggatgcc
gccgatgcgttagctatcgcgattacccattgtcacgtcagccagaatgcaatgcagatg
agcgaatcgcggctgaacctggcgagagggcgactgcgttaa
DBGET
integrated database retrieval system
