Shigella sonnei Ss046: SSON_1304
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Entry
SSON_1304 CDS
T00274
Name
(GenBank) conserved hypothetical protein
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SSON_1304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssn03400
]
SSON_1304
DNA repair and recombination proteins [BR:
ssn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SSON_1304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AAZ88017
ShiBASE_China:
SSO1304
UniProt:
Q3Z2J5
LinkDB
All DBs
Position
complement(1381516..1382178)
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AA seq
220 aa
AA seq
DB search
MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPISPQAMAIHRITEAMVAD
KPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKLARRLWPGIKYSNMALYKT
RKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQMADITGRPSLMTTFTFGKYR
GKAVSDVAERDPGYLRWLFNNLDSMSPELRLTLKHYLENT
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcattatcgatacagaaacctgcggtttgcagggagggatcgttgagattgcc
tctgttgatgtcattgacggaaaaatcgtcaaccccatgagccacctggtgcgccccgat
cgtcctattagtccacaagcgatggcgattcatcgcatcaccgaagccatggtcgccgat
aaaccgtggattgaagatgtgatcccacactattacggcagtgaatggtatgtcgcgcac
aacgccagctttgaccgccgcgtactgcctgagatgcccggtgagtggatttgcaccatg
aaactggcccgtcgcttgtggccaggaatcaagtacagcaatatggcgttatataaaaca
cggaagctcaatgtacagacgccgccgggcctgcatcatcaccgcgcgttgtatgactgt
tatatcaccgccgcgttgcttatcgatattatgaacacctccggctggacggcagaacag
atggccgatatcaccggacgtccgtcgttgatgacgaccttcacctttggcaaataccgt
ggcaaagcggtttccgacgttgccgaacgcgatccgggctatctgcgctggttatttaat
aacctggacagcatgagcccggagctgcgtttaacactgaaacattatctggaaaatact
taa
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