Shigella sonnei Ss046: SSON_1356
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Entry
SSON_1356 CDS
T00274
Symbol
fadD
Name
(GenBank) acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00061
Fatty acid biosynthesis
ssn00071
Fatty acid degradation
ssn01100
Metabolic pathways
ssn01212
Fatty acid metabolism
ssn02024
Quorum sensing
ssn04146
Peroxisome
Module
ssn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SSON_1356 (fadD)
00071 Fatty acid degradation
SSON_1356 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SSON_1356 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SSON_1356 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ssn01004
]
SSON_1356 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssn04147
]
SSON_1356 (fadD)
Enzymes [BR:
ssn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SSON_1356 (fadD)
Lipid biosynthesis proteins [BR:
ssn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SSON_1356 (fadD)
Exosome [BR:
ssn04147
]
Exosomal proteins
Exosomal proteins of breast milk
SSON_1356 (fadD)
Exosomal proteins of breast cancer cells
SSON_1356 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AAZ88067
ShiBASE_China:
SSO1356
UniProt:
Q3Z2E5
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All DBs
Position
1430364..1432049
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AA seq
561 aa
AA seq
DB search
MKKVWLNRYPADVPTEINPDRYQSLIDMFEQSVVRYADQPAFVNMGEVMTFRKLEERSRA
FAAYLQQGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS
GASAIVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAKGTVVNFVVKYIKRLVPKYHL
PDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVNA
TYGPLLHPGKELVVTALPLYHIFALTINCLLFIELGGQNLLITNPRDIPGLVKELAKYPF
TAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQVVAERWVKLTGQYLLEGYGLT
ECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPGQPGELCVKGPQVMLGYWQ
RPDATDEIIKNGWLHTGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGV
QEVAAVGVPSGSSGEAVKIFVVKKDPSLTEESLVTFCCRQLTGYKVPKLVEFRDELPKSN
VGKILRRELRDEARGKVDNKA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaggtttggcttaaccgttatcccgcggatgttccgacggagatcaaccctgac
cgttatcaatctctgatagatatgtttgagcagtcggtcgtccgctacgccgatcagcct
gcgtttgtgaatatgggggaggtaatgaccttccgcaagctggaagaacgcagtcgcgcg
tttgccgcttatttgcaacaagggttggggctgaagaaaggcgatcgcgttgcgttgatg
atgcctaatttattgcaatatccggtggcgctgtttggcattttgcgtgccgggatgatc
gtcgtaaacgttaacccgttgtataccccgcgtgagcttgagcatcagcttaacgatagc
ggcgcatcggcgattgttatcgtgtctaactttgctcacacactggaaaaagtggttgat
aaaaccgccgttcagcacgtaattctgacccgtatgggcgatcagctatctacggcaaaa
ggcacggtagtcaatttcgttgttaaatacatcaagcgtttggtgccgaaataccatctg
ccagatgccatttcatttcgtagcgcactgcataacggctaccggatgcagtacgtcaaa
cccgaactggtgccggaagatttagccttcctgcaatacaccggcggcaccacaggtgtg
gcgaaaggcgcgatgctgactcaccgcaatatgctggcgaacctggaacaggtcaacgcc
acctatgggccgttgctgcatccaggtaaagaactggtagtaacggcactgccgctgtat
cacatttttgccctgaccattaactgcctgctgtttatcgaactgggtgggcagaacctg
cttatcactaacccgcgcgatattccagggttggtaaaagagttagcgaaatatccgttt
accgctatcactggcgttaacaccttgttcaatgcgttgctgaacaataaagagttccag
cagctggatttctccagtctgcatctttccgcaggcggtgggatgccagtgcagcaagtg
gtggcagagcgttgggtgaaactgacaggacagtatctgctggaaggctatggtcttacc
gagtgtgcgccgctggtcagcgttaacccatatgatattgattatcatagtggtagcatc
ggtttgccggtgccgtcgacggaagccaaactggtggatgacgacgataatgaagtacca
ccgggtcaaccgggtgagctttgtgtcaaaggaccgcaggtgatgctgggttactggcag
cgtcccgatgctaccgatgagatcatcaaaaatggctggttacacaccggcgacatcgcg
gtgatggatgaagaagggttcctgcgcattgtcgatcgtaaaaaagacatgattctggtt
tccggttttaacgtctatcccaacgagattgaagatgtcgtcatgcagcatcctggcgta
caggaagtcgcggctgttggcgtaccttccggctccagtggtgaagcggtgaaaatcttc
gtagtgaaaaaagatccatcgcttaccgaagagtcactggtgaccttttgctgccgtcag
ctcacgggctacaaagtaccgaagctggtggagtttcgtgatgagttaccgaaatctaac
gtcggaaaaattttgcgacgagaattacgtgacgaagcgcgcggcaaagtggacaataaa
gcctga
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