Shigella sonnei Ss046: SSON_2023
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Entry
SSON_2023 CDS
T00274
Symbol
yedU
Name
(GenBank) conserved hypothetical protein
KO
K05523
D-lactate dehydratase / protein deglycase [EC:
4.2.1.130
3.5.1.124
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00620
Pyruvate metabolism
ssn01100
Metabolic pathways
ssn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
SSON_2023 (yedU)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssn01002
]
SSON_2023 (yedU)
Enzymes [BR:
ssn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.124 protein deglycase
SSON_2023 (yedU)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.130 D-lactate dehydratase
SSON_2023 (yedU)
Peptidases and inhibitors [BR:
ssn01002
]
Cysteine peptidases
Family C56: PfpI endopeptidase family
SSON_2023 (yedU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DJ-1_PfpI
DUF1786
ThiJ_like
Motif
Other DBs
NCBI-ProteinID:
AAZ88687
ShiBASE_China:
SSO2023
UniProt:
Q3Z0M5
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All DBs
Position
2117486..2118337
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AA seq
283 aa
AA seq
DB search
MTVQTSKNPQVDIAEDNAFFPSEYSLSQYTSPVSDLDGVDYPKPYRGKHKILVIAADERY
LPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPHKDEKVMPFF
EQHKSLFRNPKKLADVVASLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRF
VISLCHGPAAFLALRHGDNPLNGYSICAFPDAADKQTPEIGYMPGHLTWYFGEELKKMGM
NIINDDITGRVHKDRKVLTGDSPFAANALGKLAAQEMLAAYAD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcaaacaagtaaaaatccgcaggtcgatattgctgaagataatgcattcttc
ccttcagaatattcgcttagccaatataccagtcccgtctctgatcttgatggcgtggac
tatccaaaaccgtatcgcggtaagcataaaattctggtgatcgccgcggacgaacgttat
ttgccaaccgataacggaaaactgttctcgaccggtaaccatccgattgaaacgttgctg
ccgttgtatcatctccatgctgctggtttcgaattcgaagtggcgaccatttccggtctg
atgaccaagtttgaatactgggctatgccgcacaaagatgaaaaagtaatgccattcttt
gagcagcataaatcgttgttccgcaatccgaagaaactcgcggatgttgtcgccagcctc
aacgctgatagcgaatatgcagcaatctttgttcctggtggtcatggcgcacttattggt
ttaccagaaagccaggacgtagctgctgctttgcagtgggcaatcaaaaatgaccgtttt
gttatctccctttgccacggcccggcggcttttctggcgcttcgccacggcgataaccca
ctgaatggttattccatttgcgcattcccagacgccgcagacaaacaaacgccagagata
ggctatatgccgggtcatctcacctggtacttcggcgaagagctgaagaaaatgggcatg
aacattattaatgacgacatcaccgggcgagtacataaggaccgtaaagttctcaccggc
gacagtcctttcgcagcgaatgcgttgggtaaactggcggcgcaggaaatgctggcagct
tatgcggattaa
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