KEGG   Shigella sonnei Ss046: SSON_2215
Entry
SSON_2215         CDS       T00274                                 
Symbol
nfo
Name
(GenBank) endonuclease IV
  KO
K01151  deoxyribonuclease IV [EC:3.1.21.2]
Organism
ssn  Shigella sonnei Ss046
Pathway
ssn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ssn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SSON_2215 (nfo)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssn03400]
    SSON_2215 (nfo)
Enzymes [BR:ssn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.2  deoxyribonuclease IV
     SSON_2215 (nfo)
DNA repair and recombination proteins [BR:ssn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     SSON_2215 (nfo)
SSDB
Motif
Pfam: AP_endonuc_2
Other DBs
NCBI-ProteinID: AAZ88865
ShiBASE_China: SSO2215
UniProt: Q3Z047
LinkDB
Position
2323656..2324513
AA seq 285 aa
MKYIGAHVSAAGGLANAAIRAVEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH
YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE
DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKFRVGVCIDT
CHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG
HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA
NT seq 858 nt   +upstreamnt  +downstreamnt
atgaaatacattggagcgcacgttagtgctgctggcggtctggcaaatgccgcaattcgc
gccgtcgaaatcgacgcaaccgcgtttgccttgttcaccaaaaaccaacgtcagtggcgt
gccgcaccgctcacgacgcaaaccatcgatgaattcaaagccgcctgtgaaaaatatcac
tacacatcggcgcaaattcttccccacgacagttatctgattaacctcggacatccggtc
actgaagctctggaaaaatcgcgcgatgcctttatagatgaaatgcagcgttgcgaacaa
ctggggctttctttgctcaacttccaccctggcagccatctgatgcagatttcagaagag
gattgccttgcgcgtattgccgaatccatcaacattgcgctggataaaactcaaggtgta
acagcggtgattgaaaacaccgccggtcagggcagtaacttagggtttaaattcgaacat
ctcgcggcgattatcgacggcgtggaagataaattccgcgtcggcgtctgcattgatacc
tgccatgctttcgctgccgggtatgatttgcgtactccagccgaatgcgaaaaaacgttc
gctgattttgcccgtattgtcggctttaagtatctgcgcgggatgcaccttaacgatgcg
aaaagtacctttggcagccgcgttgaccgccatcatagcctcggtgaaggcaatatcggt
catgatgcgttccgctggatcatgcaagacgaccgtttcgacggcattccgctgatcctt
gaaaccatcaacccggatatctgggcagaagagatcgcctggctgaaagcgcaacaaact
gaaaaagcggtggcctga

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