Shigella sonnei Ss046: SSON_2215
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Entry
SSON_2215 CDS
T00274
Symbol
nfo
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SSON_2215 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssn03400
]
SSON_2215 (nfo)
Enzymes [BR:
ssn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
SSON_2215 (nfo)
DNA repair and recombination proteins [BR:
ssn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
SSON_2215 (nfo)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AAZ88865
ShiBASE_China:
SSO2215
UniProt:
Q3Z047
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All DBs
Position
2323656..2324513
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AA seq
285 aa
AA seq
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MKYIGAHVSAAGGLANAAIRAVEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYH
YTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEE
DCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKFRVGVCIDT
CHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIG
HDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacattggagcgcacgttagtgctgctggcggtctggcaaatgccgcaattcgc
gccgtcgaaatcgacgcaaccgcgtttgccttgttcaccaaaaaccaacgtcagtggcgt
gccgcaccgctcacgacgcaaaccatcgatgaattcaaagccgcctgtgaaaaatatcac
tacacatcggcgcaaattcttccccacgacagttatctgattaacctcggacatccggtc
actgaagctctggaaaaatcgcgcgatgcctttatagatgaaatgcagcgttgcgaacaa
ctggggctttctttgctcaacttccaccctggcagccatctgatgcagatttcagaagag
gattgccttgcgcgtattgccgaatccatcaacattgcgctggataaaactcaaggtgta
acagcggtgattgaaaacaccgccggtcagggcagtaacttagggtttaaattcgaacat
ctcgcggcgattatcgacggcgtggaagataaattccgcgtcggcgtctgcattgatacc
tgccatgctttcgctgccgggtatgatttgcgtactccagccgaatgcgaaaaaacgttc
gctgattttgcccgtattgtcggctttaagtatctgcgcgggatgcaccttaacgatgcg
aaaagtacctttggcagccgcgttgaccgccatcatagcctcggtgaaggcaatatcggt
catgatgcgttccgctggatcatgcaagacgaccgtttcgacggcattccgctgatcctt
gaaaccatcaacccggatatctgggcagaagagatcgcctggctgaaagcgcaacaaact
gaaaaagcggtggcctga
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