Shigella sonnei Ss046: SSON_2279
Help
Entry
SSON_2279 CDS
T00274
Symbol
atoC
Name
(GenBank) response regulator of ato
KO
K07714
two-component system, NtrC family, response regulator AtoC
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SSON_2279 (atoC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ssn02022
]
SSON_2279 (atoC)
Two-component system [BR:
ssn02022
]
NtrC family
AtoS-AtoC (cPHB biosynthesis)
SSON_2279 (atoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
PDE8A_N
HTH_50
AAA_2
AAA_16
nSTAND3
AAA_3
VpsR
AAA_22
FleQ
ATPase
Motif
Other DBs
NCBI-ProteinID:
AAZ88926
ShiBASE_China:
SSO2279
UniProt:
Q3YZY6
LinkDB
All DBs
Position
2396839..2398224
Genome browser
AA seq
461 aa
AA seq
DB search
MTAINRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPE
MDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRAL
QLQSMKKEIRHLHQALSASWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKE
LIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGT
LLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFRE
DLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPG
NIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGEVKTASVGERNLKEEIKRVEKR
IIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGIDPADV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgactgctattaatcgcatccttattgtggatgatgaagataatgttcgccgtatgctg
agcaccgcttttgcactacaaggattcgaaacacattgtgcgaacaacggacgcacagca
ttacacctgtttgccgatattcaccctgatgtggtgttgatggatatccgcatgccagag
atggacggcatcaaggcactaaaggagatgcgcagccatgagacccggacacccgttatt
ctgatgacggcctatgcggaagtggaaaccgccgtcgaagcgctacgctgcggagccttc
gactatgttattaaaccgtttgatctcgatgagttgaatttaatcgttcagcgcgcttta
caactccagtcaatgaaaaaagagatccgtcatctgcaccaggcactgagcgccagctgg
caatgggggcacattctcaccaacagcccggcgatgatggacatctgcaaagacaccgcc
aaaattgccctttctcaggccagcgtcttgattagcggtgaaagcggcaccgggaaagag
ttgattgccagagcgattcactacaattcgcggcgggcaaaggggccgttcattaaagtc
aactgcgcggcgctgccggaatcgttgctcgaaagtgaactgtttggtcatgaaaaaggt
gcatttactggtgcacaaaccttgcgtcagggattatttgaacgagccaacgaaggtact
ctgctcctcgacgaaattggcgaaatgccgctggtactacaagccaaattactacgcatt
ctacaggaacgggaatttgaacggattggcggccatcagaccataaaagttgatatccgc
atcattgctgccaccaaccgtgacttgcaggcaatggtaaaagaaggcaccttccgtgaa
gatctcttttatcgccttaacgttattcatttaatactgccgcctctgcgcgatcgccgg
gaagatatttccctgttagctaatcactttttgcaaaaattcagtagtgagaatcagcgc
gatattatcgacatcgatccgatggcaatgtcactgcttaccgcctggtcatggccggga
aatattcgagagctttctaacgttattgaacgcgccgtcgtgatgaattcaggcccgatc
attttttctgaggatcttccgccacagattcgtcagccagtctgtaatgctggcgaggta
aaaacagcctctgtcggtgagcgtaatttaaaagaggaaattaaacgcgtcgaaaaacgc
atcattatggaagtgctggaacaacaagaaggaaaccgaacccgcactgctttaatgctg
ggcatcagtcgccgtgcattgatgtataaactccaggaatacggtatcgatccggcggat
gtataa
DBGET
integrated database retrieval system
