Shigella sonnei Ss046: SSON_2325
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Entry
SSON_2325 CDS
T00274
Symbol
menD
Name
(GenBank) 2-oxoglutarate decarboxylase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00130
Ubiquinone and other terpenoid-quinone biosynthesis
ssn01100
Metabolic pathways
ssn01110
Biosynthesis of secondary metabolites
ssn01240
Biosynthesis of cofactors
Module
ssn_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
SSON_2325 (menD)
Enzymes [BR:
ssn01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
SSON_2325 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
AAZ88970
ShiBASE_China:
SSO2325
UniProt:
Q3YZU2
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Position
complement(2453424..2455094)
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AA seq
556 aa
AA seq
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MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGH
LALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAI
RQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHSGGVHINCPFAEPLYGEMDD
TGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALW
AQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQAS
CEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAV
IARRDAFGEAQLAHRISDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDG
LLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLILIVVNNNGGQIFSLLPT
PKSERERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETALADAWRTPTTTVIEMVVNDT
DGAQTLQQLLAQVSHL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaagcgcatttaaccgacgctgggcggcggtcattctggaagcattaacgcgt
cacggcgtcagacacatctgtatcgcccctggctcgcgttctacaccgttaacgttagcg
gcggcggagaattccgcattcattcaccacacccatttcgatgagcgtgggttggggcat
ctggcgctggggctggcgaaagtcagcaagcagccggtggcggtgattgtgacctccggt
acggcggtagcaaatctctatccggcactgattgaagctgggttaaccggagaaaaactg
atcctgttaaccgccgatcgcccgccggagctgattgactgcggcgcgaatcaggcgatt
cgtcagccgggaatgttcgcctctcaccccacgcacagtatttcattgccgcgcccgacc
caggatatccccgcacgttggctggtttctaccatcgaccatgctctcggtacgcttcat
tctggtggagtccatatcaactgcccgtttgccgaaccgctgtatggcgaaatggacgac
accgggcttagctggcaacagcggctgggcgactggtggcaggacgacaaaccgtggctg
cgtgaagcgcctcgtctggaaagtgaaaaacagcgcgactggttcttctggcgacaaaaa
cgcggcgtggtggttgccgggcgcatgagtgcggaagagggcaaaaaagttgcactgtgg
gcgcaaactcttggctggccgctgattggcgacgtgctgtcgcaaaccggacagccgctg
ccgtgtgccgatctctggttaggcaatgccaaagcgaccagcgaactgcaacaggcgcaa
attgtggtgcaactgggaagcagcctgacgggcaaacggctcctgcaatggcaggcaagc
tgtgaacccgaagagtactggattgtggatgacatcgaagggcggcttgatccggcgcac
catcgtggacgccgcttaattgccaatattgccgactggctggagctgcatccggcagaa
aaacgccagccctggtgcgttgaaatcccgcgcctggcggaacaggcaatgcaggcggtt
attgcccgtcgcgatgcgtttggcgaagcgcaactggcgcatcgcatcagcgactatctg
cctgaacaggggcaattgtttgtcggtaacagcctggtggtacgtctgattgatgcgctt
tcgcaacttccggcaggttacccggtgtacagcaaccgtggggccagcggtatcgacggg
ctgctctcgactgccgccggcgttcagcgggcaagcggcaaaccgacgctggcgattgtg
ggcgatctctccgcactttacgatctcaacgcgctggcgttattgcgtcaggtttccgcg
ccgctgatattaattgtggtgaacaacaacggcgggcaaattttctcgctgctgccaacg
ccgaaaagcgagcgcgagcgtttctatctgatgccgcaaaacgtccattttgagcacgcc
gccgcgatgttcgagctgaaatatcatcgtccgcaaaactggcaggaacttgaaacggca
cttgccgatgcctggcgcacgccaaccaccacggtaattgaaatggtggttaacgacacc
gatggtgcgcaaacgctccagcaacttctggcgcaggtaagccatttatga
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