Shigella sonnei Ss046: SSON_2634
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Entry
SSON_2634 CDS
T00274
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00260
Glycine, serine and threonine metabolism
ssn00460
Cyanoamino acid metabolism
ssn00630
Glyoxylate and dicarboxylate metabolism
ssn00670
One carbon pool by folate
ssn00680
Methane metabolism
ssn01100
Metabolic pathways
ssn01110
Biosynthesis of secondary metabolites
ssn01120
Microbial metabolism in diverse environments
ssn01200
Carbon metabolism
ssn01230
Biosynthesis of amino acids
ssn01240
Biosynthesis of cofactors
ssn04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SSON_2634 (glyA)
09102 Energy metabolism
00680 Methane metabolism
SSON_2634 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SSON_2634 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
SSON_2634 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SSON_2634 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
SSON_2634 (glyA)
Enzymes [BR:
ssn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
SSON_2634 (glyA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AAZ89258
ShiBASE_China:
SSO2634
UniProt:
Q3YZ04
LinkDB
All DBs
Position
complement(2788228..2789481)
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AA seq
417 aa
AA seq
DB search
MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLEPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEKQAKEHKPKMIIGGFSAYSGV
VDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVE
VFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRVGTPAITRRGFKEAEAKELAGWMCDVLDSINDEAVIERIKGKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaactgtggcaggctatggag
caggaaaaagtacgtcaggaagagcacatcgaactgatcgcctccgaaaactacaccagc
ccgcgcgtaatgcaggcgcagggttctcagctgaccaacaaatatgctgaaggttatccg
ggcaaacgctactacggcggttgcgagtatgttgatatcgttgaacaactggcgatcgat
cgtgcgaaagaactgttcggcgctgactacgctaacgtccagccgcactccggctcccag
gctaactttgcggtctacaccgcgctgctggaaccaggtgataccgttctgggtatgaac
ctggcgcatggcggtcacctgactcacggttctccggttaacttctccggtaaactgtac
aacatcgttccttacggtatcgatgctaccggtcatatcgactacgccgatctggaaaaa
caagccaaagaacacaagccgaaaatgattatcggtggtttctctgcatattccggcgtg
gttgactgggcgaaaatgcgtgaaatcgctgacagcatcggtgcttacctgttcgttgat
atggcgcacgttgcgggcctggttgctgctggcgtctacccgaacccggttcctcatgct
cacgttgttactaccaccactcacaaaaccctggcgggtccgcgcggcggcctgatcctg
gcgaaaggtggtagcgaagagctgtacaaaaaactgaactctgccgttttccctggtggt
cagggcggtccgttgatgcacgtaatcgccggtaaagcggttgctctgaaagaagcgatg
gagcctgagttcaaaacttaccagcagcaggtcgcgaaaaacgctaaagcgatggtagaa
gtgttcctcgagcgcggctacaaagtggtttccggcggcactgataaccacctgttcctg
gttgatctggttgataaaaacctgaccggtaaagaagcagacgccgctctgggccgtgct
aacatcaccgtcaacaaaaacagcgtaccgaacgatccgaagagcccgtttgtgacctcc
ggtattcgcgtgggtactccggcgattacgcgtcgcggcttcaaagaagcagaagcgaaa
gaactggctggctggatgtgtgacgtgctggacagcatcaatgatgaagccgttatcgag
cgcatcaaaggtaaagttctcgacatctgcgcacgtttcccggtttacgcataa
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