Shigella sonnei Ss046: SSON_2805
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Entry
SSON_2805 CDS
T00274
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase, NADP-dependent activity
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00250
Alanine, aspartate and glutamate metabolism
ssn00310
Lysine degradation
ssn00350
Tyrosine metabolism
ssn00650
Butanoate metabolism
ssn00760
Nicotinate and nicotinamide metabolism
ssn01100
Metabolic pathways
ssn01120
Microbial metabolism in diverse environments
Module
ssn_M00027
GABA (gamma-Aminobutyrate) shunt
ssn_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SSON_2805 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SSON_2805 (gabD)
00310 Lysine degradation
SSON_2805 (gabD)
00350 Tyrosine metabolism
SSON_2805 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
SSON_2805 (gabD)
Enzymes [BR:
ssn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
SSON_2805 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
SSON_2805 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
SSON_2805 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AAZ89416
ShiBASE_China:
SSO2805
UniProt:
Q3YYJ6
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Position
2950949..2952397
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AA seq
482 aa
AA seq
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MKLNDSNLFRQQALINGEWLDANNGGIIDVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPAWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVSKLHIGDGLDKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
DERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaacgacagtaacttattccgccagcaggcgttgattaacggggaatggctg
gacgccaacaatggcgggatcatcgacgtcaccaatccggcgaacggcgacaagctgggt
agcgtgccgaaaatgggcgctgatgaaacccgcgccgctatcgacgccgccaaccgcgcc
ctgcccgcctggcgtgcgctcaccgccaaagaacgcgccaacattctgcgcaactggttc
aatttgatgatggagcatcaggacgatttagcgcgcctgatgaccctcgaacagggcaaa
ccactggccgaagcgaaaggcgaaatcagctacgctgcctcttttattgagtggtttgcc
gaagaaggcaaacgtatttatggcgataccattcccggtcatcaggccgataagcgcctg
attgttatcaagcagccgattggcgttaccgcagctatcacgccgtggaacttcccggcg
gcgatgattacccgtaaagccggtccggcgctggcggcaggctgcaccatggtgctgaag
cccgccagtcagacaccgttctctgcgctggcgctggcggagctggcgattcgcgcgggc
attccggctggcgtgtttaacgtagtcaccggttcggcaggcgcggtcggtaatgaactg
accagcaacccgctggtacgcaaactgtcgtttaccggttcgaccgaaattggccgccag
ttaatggaacagtgcgcgaaagacatcaaaaaagtgtcgctggagctgggcggcaacgcg
ccgtttatcgtctttgacgatgccgatctcgataaagccgtggaaggcgcgctggcctcg
aaattccgcaacgccgggcaaacctgcgtctgcgccaaccgtttatacgtgcaggacggc
gtgtatgaccgctttgccgaaaaattgcagcaggcggtgagcaaactgcacatcggcgac
gggctggataaaggcgtcaccatcgggccgctgatcgatgaaaaagcggtagcaaaagtg
gaagagcatattgccgatgcgctggagaaaggtgcgcgtgtggtttgcggcggtaaagcg
gatgaacgcggcggcaacttcttccagccgaccattctggtggacgtgccggccaacgcc
aaagtgtcgaaagaagagacgttcggccccctcgccccgctgttccgctttaaagatgaa
gccgatgtgattgcgcaagccaatgacaccgagtttggccttgccgcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaagcgctggagtacggcatcgtcggcatc
aataccggcattatttccaatgaagtggccccgttcggcggcatcaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa
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