Shigella sonnei Ss046: SSON_2853
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Entry
SSON_2853 CDS
T00274
Symbol
ygaA
Name
(GenBank) putative 2-component transcriptional regulator
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssn03000
]
SSON_2853 (ygaA)
Transcription factors [BR:
ssn03000
]
Prokaryotic type
Helix-turn-helix
Other families
SSON_2853 (ygaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
GAF_2
Mg_chelatase
AAA_5
MCM
AAA
GAF_3
AAA_16
AAA_2
AAA_19
AAA_22
AAA_30
DBD_HTH
HTH_8
Motif
Other DBs
NCBI-ProteinID:
AAZ89457
ShiBASE_China:
SSO2853
UniProt:
Q3YYF5
LinkDB
All DBs
Position
complement(2992013..2993602)
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AA seq
529 aa
AA seq
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MSSQNDYQSNGRYDNIYSQIDSEAKMSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQV
LECDASALLRYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELP
DPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAG
ALSNALLIEQLESQNMMPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISG
ETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKF
EMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEV
MAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGARNLL
QHYRFPGNVRELEHAIHRAVVLARATRNGDEVILEAQHFAFPEVTLPPPEAAAVPVVKQN
LREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGMKD
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtcaaaatgactatcaatcaaatggtcgatatgacaatatctatagtcaaatt
gacagtgaggcaaagatgagtttttccgttgatgtgctggcgaatatcgccatcgaattg
cagcgtgggattggtcatcaggatcgttttcagcgcctgatcaccacgctacgtcaggtg
ctggagtgcgatgcgtctgcgttgctacgttacgattcgcggcagtttattccgcttgcc
atcgacggtctggcaaaggatgtactcggtagacgctttgcgctggaagggcatccacgg
ctggaagcgattgcccgcgccggggatgtggtgcgctttcccgcagacagcgaattgccc
gatccctatgacggtttgattcctgggcaggagagtctgaaggttcacgcctgcgttggt
ctgccattgtttgccgggcaaaacctgatcggcgcactgacgctcgacgggatgcagccc
gatcagttcgatgttttcagcgacgaagagctacggctgattgctgcgctggcggcggga
gcgttaagcaatgcgttgctgattgaacaactggaaagccagaatatgatgccaggcgat
gccacgccgtttgaagcggtgaaacagacgcagatgattggcttgtcccctggcatgacg
caactgaaaaaagagattgagattgtggcggcgtccgatctcaacgtcctgatcagcggt
gagacgggaaccggtaaggagctggtggcgaaagcgattcatgaagcctcgccacgggcg
gtgaatccgctggtctatctcaactgtgctgcactgccggaaagtgtggcggaaagtgag
ttgttcgggcatgtgaaaggagcgtttactggcgctatcagtaaccgcagcgggaagttt
gaaatggcggataacggcactctgtttctggatgagatcggcgagttgtcgttggcattg
caggccaagctgctgagggtgttgcagtatggcgatattcagcgcgttggcgatgaccgt
agtttgcgggtcgatgtgcgcgtgctggcggcgactaaccgcgacttacgcgaagaggtg
atggcagggcgatttcgcgctgacttgtttcatcgcctgagcgtgtttccactttcggtg
ccgccgctgcgtgagcggggcgatgatgtcattctgctggcggggtatttctgcgagcag
tgtcgtttgcggctggggctctcccgcgtggtattaagtgccggagcgcgaaatttactg
caacactatcgttttccggggaacgtgcgcgaactggaacatgctattcatcgggcggta
gtgctggcgagagccacccgcaacggcgatgaagtgattcttgaggcgcaacattttgct
tttcctgaggtgacgttgccgccgccagaagcggcggcggtgcccgttgttaagcaaaac
ctgcgtgaagcgacagaagcgttccagcgtgaaactattcgccaggcactggcacaaaat
catcataactgggctgcctgcgcgcggatgctggaaaccgacgtcgccaacctgcatcgg
ctggcgaaacgtctgggaatgaaggattaa
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