KEGG   Shigella sonnei Ss046: SSON_2894
Entry
SSON_2894         CDS       T00274                                 
Symbol
ygbB
Name
(GenBank) conserved hypothetical protein
  KO
K01770  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
Organism
ssn  Shigella sonnei Ss046
Pathway
ssn00900  Terpenoid backbone biosynthesis
ssn01100  Metabolic pathways
ssn01110  Biosynthesis of secondary metabolites
Module
ssn_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:ssn00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    SSON_2894 (ygbB)
Enzymes [BR:ssn01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.12  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
     SSON_2894 (ygbB)
SSDB
Motif
Pfam: YgbB DUF6630
Other DBs
NCBI-ProteinID: AAZ89496
ShiBASE_China: SSO2894
UniProt: Q3YYB6
LinkDB
Position
complement(3034945..3035424)
AA seq 159 aa
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL
FPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDL
GCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
NT seq 480 nt   +upstreamnt  +downstreamnt
atgcgaattggacacggttttgacgtacatgcctttggcggtgaaggcccaattatcatt
ggtggcgtacgcattccttacgaaaaaggattgctggcgcattctgatggcgacgtggcg
ctccatgcgttgaccgatgcattgcttggcgcggcggcgctgggggatatcggcaagctg
ttcccggataccgatccggcatttaaaggtgccgacagccgcgagctgctacgcgaagcc
tggcgtcgtattcaggcgaagggttataccctgggcaacgtcgatgtcactattatcgct
caggcaccgaagatgttgccgcacattccacaaatgcgcgtgtttattgccgaagatctc
ggctgccatatggatgatgttaacgtgaaagccactactacggaaaaacttggatttacc
ggacgtggggaagggattgcctgtgaagcggtggcgctactcattaaggcaacaaaatga

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