Shigella sonnei Ss046: SSON_2894
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Entry
SSON_2894 CDS
T00274
Symbol
ygbB
Name
(GenBank) conserved hypothetical protein
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00900
Terpenoid backbone biosynthesis
ssn01100
Metabolic pathways
ssn01110
Biosynthesis of secondary metabolites
Module
ssn_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SSON_2894 (ygbB)
Enzymes [BR:
ssn01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
SSON_2894 (ygbB)
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Motif
Pfam:
YgbB
DUF6630
Motif
Other DBs
NCBI-ProteinID:
AAZ89496
ShiBASE_China:
SSO2894
UniProt:
Q3YYB6
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All DBs
Position
complement(3034945..3035424)
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AA seq
159 aa
AA seq
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MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKL
FPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDL
GCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattggacacggttttgacgtacatgcctttggcggtgaaggcccaattatcatt
ggtggcgtacgcattccttacgaaaaaggattgctggcgcattctgatggcgacgtggcg
ctccatgcgttgaccgatgcattgcttggcgcggcggcgctgggggatatcggcaagctg
ttcccggataccgatccggcatttaaaggtgccgacagccgcgagctgctacgcgaagcc
tggcgtcgtattcaggcgaagggttataccctgggcaacgtcgatgtcactattatcgct
caggcaccgaagatgttgccgcacattccacaaatgcgcgtgtttattgccgaagatctc
ggctgccatatggatgatgttaacgtgaaagccactactacggaaaaacttggatttacc
ggacgtggggaagggattgcctgtgaagcggtggcgctactcattaaggcaacaaaatga
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