Shigella sonnei Ss046: SSON_2952
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Entry
SSON_2952 CDS
T00274
Symbol
ygdH
Name
(GenBank) conserved hypothetical protein
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00230
Purine metabolism
ssn00240
Pyrimidine metabolism
ssn01100
Metabolic pathways
ssn01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SSON_2952 (ygdH)
00240 Pyrimidine metabolism
SSON_2952 (ygdH)
Enzymes [BR:
ssn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
SSON_2952 (ygdH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
Motif
Other DBs
NCBI-ProteinID:
AAZ89551
ShiBASE_China:
SSO2952
UniProt:
Q3YY61
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All DBs
Position
3096035..3097399
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AA seq
454 aa
AA seq
DB search
MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNSGSLTDNSKELLSRFEN
FDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLRDILFVYGQIHNTVRFPNL
NLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSINENEYLYARRVGNQLGLRELN
ICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPSIIAAEPPNPLVNELIIMPDIEK
RLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPANKDQVLPLFLTGPKESADYFRVLD
EFVVHTLGENARRHYRIIIDDAAEVARQMKKSMPLVKENRRDTGDAYSFNWSMRIAPDLQ
MPFEPSHENMANLKLYPDQPVEVLAADLRRAFSGIVAGNVKEVGIRAIEEFGPYKINGDK
EIMRRMDDLLQGFVAQHRMKLPGSAYIPCYEICT
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgattacacatattagcccgcttggctccatggatatgttgtcgcagctggaagtggat
atgcttaaacgcaccgccagcagcgacctctatcaactgtttcgcaactgttcacttgcc
gtactgaactccggtagtttgaccgataacagcaaagaattgctgtctcgttttgaaaat
ttcgatattaacgtcctgcgccgtgaacgcggcgtaaagctggaactgattaatcccccg
gaagaggcttttgtcgatgggcgaattattcgcgcgttgcaggccaacttgttcgcggtt
ctgcgtgacattctcttcgtttacgggcaaatccataacaccgttcgttttcccaacctg
aatctcgacaactccgtccacatcactaacctggtcttttccatcttgcgtaacgctcgc
gcactgcatgtcggtgaagcgccaaatatggtggtctgctggggcggacactcaattaac
gaaaacgagtatttgtatgcccgtcgcgtcgggaatcagctgggcctgcgtgagctgaat
atctgcaccggctgtggtccgggagcgatggaagcgccgatgaaaggtgctgcggtcgga
cacgcacagcagcgttacaaagacagtcgttttattggtatgacagagccgtcgattatc
gccgctgaaccgcctaacccgctggtcaacgaattgatcatcatgccagatatcgaaaaa
cgtctggaagcgtttgtccgtatcgctcacggcatcattatcttccctggcggtgtgggt
acggcagaagagttgctgtatttgctgggaattttaatgaacccggccaacaaagatcag
gttttaccattgttcctcaccggcccgaaagagagcgccgactacttccgcgtactggac
gagtttgtcgtgcatacgttgggtgaaaacgcgcgccgccattaccgcatcatcattgat
gacgccgctgaagtcgctcgtcagatgaaaaaatcgatgccgctggtgaaagaaaatcgc
cgcgacacaggcgatgcctacagctttaactggtcaatgcgcattgcgccagatttgcaa
atgccgtttgagccgtctcacgagaatatggctaatctgaagctttacccggatcaacct
gttgaagtgctggctgccgatctgcgccgtgcgttctccggtattgtggcgggtaacgta
aaagaagtcggtattcgcgccattgaagagtttggtccttacaaaatcaacggcgataaa
gagattatgcgtcgtatggacgacctgctacagggttttgttgcccagcatcgtatgaag
ttgccaggctcagcctacatcccttgctacgaaatctgcacgtaa
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