Shigella sonnei Ss046: SSON_2969
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Entry
SSON_2969 CDS
T00274
Symbol
ygdL
Name
(GenBank) putative enzyme
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssn03016
]
SSON_2969 (ygdL)
Transfer RNA biogenesis [BR:
ssn03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SSON_2969 (ygdL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
DAO
Sacchrp_dh_NADP
UDPG_MGDP_dh_N
3HCDH_N
NAD_binding_7
ELFV_dehydrog
ApbA
NT5C
Motif
Other DBs
NCBI-ProteinID:
AAZ89567
ShiBASE_China:
SSO2969
UniProt:
Q3YY45
LinkDB
All DBs
Position
complement(3114812..3115618)
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AA seq
268 aa
AA seq
DB search
MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLI
DMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSV
GYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAK
LRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGA
ATMVTATFGFVAVSHALKKMMAKAARQG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtaattagtgatgcatggcgtcagcgttttggtggcacagcgcgtctgtat
ggtgaaaaagcgttgcaactgtttgctgacgcgcatatttgtgtggttggtatcggtggt
gtcggttcctgggcggcggaagcgctggcgcgcacggggattggcgcaatcacgcttatc
gatatggatgatgtgtgcgtcaccaataccaatcggcaaattcacgctctgcgcgataac
gtcgggctggcaaaagcggaagtcatggcggagcgtattcgccagattaacccggagtgc
cgtgtaacggtggtggatgatttcgtgacgccggataacgtagcgcagtatatgagcgtg
ggttattcgtacgtgattgatgccattgatagtgtacggcccaaagcggcgctgattgct
tattgtcggcgcaataaaatcccgctggtcacgaccggtggcgcgggtgggcagattgac
ccgacgcagattcaggttaccgatctggcgaaaacgattcaggatccgctggcggcgaag
ttgcgcgagcgcctgaaaagcgattttggcgtagtgaaaaacagtaaaggtaagctcggc
gtcgattgcgtgttttctactgaagcgctggtgtacccgcagtcagacggtactgtgtgt
gcgatgaaagccacggcagaagggccgaagcggatggattgtgcatctggatttggcgcg
gcaacgatggtgaccgccacctttgggtttgttgcggtttctcatgcgctgaagaagatg
atggcgaaagcggcgcgtcagggttaa
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