Shigella sonnei Ss046: SSON_3047
Help
Entry
SSON_3047 CDS
T00274
Symbol
xerD
Name
(GenBank) site-specific recombinase
KO
K04763
integrase/recombinase XerD
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ssn03036
]
SSON_3047 (xerD)
Chromosome and associated proteins [BR:
ssn03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SSON_3047 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF2064
Motif
Other DBs
NCBI-ProteinID:
AAZ89636
ShiBASE_China:
SSO3047
UniProt:
Q3YXX6
LinkDB
All DBs
Position
complement(3208653..3209549)
Genome browser
AA seq
298 aa
AA seq
DB search
MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLA
ERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVER
LLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVP
LGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaggatctggcacgcatcgagcagtttcttgatgctctgtggctggaaaaaaat
ctggctgaaaatacgttgaacgcttaccgtcgcgatctgtcaatgatggtggagtggttg
catcaccgcgggttgacgctggcgacggcgcaaagtgacgatttgcaggcattactggca
gaacggctggagggcgggtataaagccaccagctcagcgcgtttgctgagtgcagtgcgc
cgattgttccagtatctttatcgcgaaaagtttcgtgaagacgatcccagtgcgcatctc
gcttcaccgaaattgccccagcgtttgccaaaagatttaagcgaagcgcaggtcgaacgt
ttattacaggcgccattaattgatcagccactggagctacgcgataaagccatgcttgaa
gtgttgtatgctaccgggctgcgtgtctctgaactggtcgggctgacaatgagtgatatc
agcctgcgtcagggcgtagtgcgggtcattggtaaaggcaacaaagagcgcctggtaccg
ttaggtgaagaggcggtttactggctggaaacctatctggaacatgggcgtccgtggctg
ctgaatggtgtgtcaattgacgtgttgtttcccagccagcgtgcgcagcagatgacgcga
cagaccttctggcaccgcattaaacattatgccgtgctggcgggtatcgacagcgaaaag
ctgtcaccgcatgtgttgcgtcacgcttttgccactcatttattaaatcatggtgcggat
ttacgcgtggtgcagatgctactgggccacagcgatctttccaccacgcaaatttatacg
catgtcgctaccgagcgtctgcggcaacttcatcaacagcatcacccgcgggcgtga
DBGET
integrated database retrieval system
