Shigella sonnei Ss046: SSON_3139
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Entry
SSON_3139 CDS
T00274
Symbol
hybC
Name
(GenBank) probable large subunit, hydrogenase-2
KO
K06281
hydrogenase large subunit [EC:
1.12.99.6
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00633
Nitrotoluene degradation
ssn01120
Microbial metabolism in diverse environments
ssn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
SSON_3139 (hybC)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SSON_3139 (hybC)
Enzymes [BR:
ssn01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
SSON_3139 (hybC)
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Gene cluster
GFIT
Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
AAZ89723
ShiBASE_China:
SSO3139
UniProt:
Q3YXN9
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Position
complement(3297721..3299424)
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AA seq
567 aa
AA seq
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MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEIVKNRDPRDAWMIVQRI
CGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTHDHIVHFYQLSALDWVDIT
SALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVASGQLGIFANGYWGHPAMKLP
PEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNLAVGGVANPINLDGLGVLNLERL
MYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRGKGAVNYLSVPEFPTDSKNGSFLFP
GGYIENADLSSYRPITSHSDEYLIKGIQESAKHSWYKDEAPQAPWEGTTIPAYDGWSDDG
KYSWVKSPTFYGKTVEVGPLANMLVKLAAGRESTQNKLNEIVAIYQKLTGNTLEVAQLHS
TLGRIIGRTVHCCELQDILQNQYSALITNIGKGDHTTFVKPNIPATGEFKGVGFLEAPRG
MLSHWMVIKDGIISNYQAVVPSTWNSGPRNFNDDVGPYEQSLVGTPVADPNKPLEVVRTI
HSFDPCMACAVHVVDADGNEVVSVKVL
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagaattactattgatccggtaacccgtattgaggggcatttacgcatcgat
tgcgaaatcgaaaatggcgtcgtttcgaaagcatgggcttccggtaccatgtggcgcggc
atggaagagatcgtgaaaaaccgcgatccgcgcgatgcatggatgattgtgcaacgtatc
tgtggcgtatgtactaccactcacgcgctgtcttccgttcgtgcggcagaaagtgcgctg
aatatcgacgttccggttaacgcgcaatacatccgtaacatcattctggctgcgcacacc
acgcatgaccatatcgttcatttctatcagctttcggcgctggactgggtggacatcact
tctgcactgcaagctgacccaaccaaagcctccgaaatgctgaaaggcgtttcgacctgg
catctgaacagtccggaagagttcactaaagttcagaacaagatcaaagatctggttgcc
agcggtcagttgggtattttcgccaatggctactggggtcacccggcgatgaaactgccg
ccggaagtgaacctgattgcggtagcgcactacctgcaggcgctggagtgccagcgtgac
gctaaccgcgtcgtggcgctgctgggcggtaaaacgccgcacattcagaacctggcggta
ggtggtgtcgcgaacccgatcaacctcgacggtttgggcgtgctgaaccttgagcgcctg
atgtacatcaagtctttcatcgacaagctgagcgactttgttgaacaggtttataaggtt
gataccgcagttattgccgcgttctacccggaatggctgacgcgcggtaaaggtgcggtg
aactacctgagcgtgccggaattcccgaccgacagtaaaaacggcagcttcctgttcccg
ggcggctacattgagaatgcggatctgtcctcgtatcgtccgatcacttctcattccgat
gaatacctgatcaaaggcattcaggaaagcgcgaagcactcctggtataaagacgaagcg
ccgcaggcaccgtgggaaggtaccaccattccggcttatgatggttggtctgacgacggg
aaatattcctgggtgaaatcaccgactttctacggcaaaacggtagaagtgggtccgctg
gctaatatgctggtgaaactggcggcaggtcgcgaatctacccagaacaaactgaatgaa
atcgttgcgatttatcagaaactgactggcaacacgctggaagtggcgcagctgcactcc
acgctgggccgtattattggtcgtaccgttcactgctgcgaattgcaggatatcctgcaa
aatcaatacagtgcactgatcaccaatatcggcaaaggcgatcacaccacctttgtgaaa
ccgaacattccggcaacgggtgagttcaaaggtgttggcttcctcgaagcgccgcgcggt
atgctctctcactggatggttattaaagacggtattatcagtaactaccaggcagttgtt
ccatcaacctggaactctggtccgcgtaacttcaatgatgacgtcggtccttacgagcag
tcgctggtgggtacaccggttgctgatccgaataaaccgctggaagtggtgcgtaccatt
cactccttcgacccgtgcatggcctgtgcggtacacgtagtggatgccgacggcaacgaa
gtggtttcagtgaaggttctgtaa
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