Shigella sonnei Ss046: SSON_3345
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Entry
SSON_3345 CDS
T00274
Symbol
yrbH
Name
(GenBank) putative isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00541
Biosynthesis of various nucleotide sugars
ssn01100
Metabolic pathways
ssn01250
Biosynthesis of nucleotide sugars
Module
ssn_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SSON_3345 (yrbH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ssn01005
]
SSON_3345 (yrbH)
Enzymes [BR:
ssn01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
SSON_3345 (yrbH)
Lipopolysaccharide biosynthesis proteins [BR:
ssn01005
]
Lipid A
SSON_3345 (yrbH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
DUF2529
Motif
Other DBs
NCBI-ProteinID:
AAZ89918
ShiBASE_China:
SSO3345
UniProt:
Q3YX44
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All DBs
Position
3520340..3521326
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AA seq
328 aa
AA seq
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MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEKMFWCKGKVVVMGMGKS
GHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLK
RLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLK
ARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMT
VICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSR
HITSVMVADGDHLLGVLHMHDLLRAGVV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgtagagttacaaccgggttttgactttcagcaagcaggtaaagaagtcctg
gcgattgaacgtgaatgcctggcggagcttgatcaatacatcaatcagaatttcacgctt
gcctgtgaaaagatgttctggtgtaaagggaaagttgtcgtcatggggatggggaaatcg
gggcacatcgggcgcaaaatggccgcaacgtttgccagcaccggtacaccttcatttttc
gtccatcctggtgaagccgcgcatggtgatttaggcatggtcaccccacaggatgtggtg
attgctatctctaactcaggtgaatccagcgaaatcacggccttaattccagtgcttaag
cgtcttcacgtaccgttaatctgcatcaccggtcgcccggagagcagcatggcgcgcgcc
gcagatgtgcatctgtgtgttaaagtagcgaaagaagcctgtccgttagggctggcaccg
accagcagcaccaccgccacgctggttatgggcgatgccctcgctgtcgcgctgttaaaa
gcacgcggctttactgctgaagattttgcgctctcacacccaggcggcgcactgggtcgt
aaacttctgctgcgcgtaaacgatattatgcatacgggcgatgagatcccgcatgttaag
aaaacggccagtctgcgtgacgcgttgctggaagttacccgcaaaaatcttggtatgact
gtcatttgcgatgacaatatgatgattgaaggcatctttaccgacggtgatttacgccgt
gtcttcgatatgggcgtggatgttcgtcagttaagtattgccgatgtgatgacgccgggg
ggaatacgtgtgcgccctggcattctggccgttgaggcactgaacttaatgcagtcccgc
catatcacctccgtgatggttgccgatggcgaccatttactcggagtgttacatatgcat
gatttactgcgtgcaggcgtagtgtaa
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