Shigella sonnei Ss046: SSON_3784
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Entry
SSON_3784 CDS
T00274
Symbol
rfaC
Name
(GenBank) heptosyl transferase I
KO
K02841
lipopolysaccharide heptosyltransferase I [EC:
2.4.99.23
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn00540
Lipopolysaccharide biosynthesis
ssn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SSON_3784 (rfaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ssn01005
]
SSON_3784 (rfaC)
Enzymes [BR:
ssn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.23 lipopolysaccharide heptosyltransferase I
SSON_3784 (rfaC)
Lipopolysaccharide biosynthesis proteins [BR:
ssn01005
]
Core region
SSON_3784 (rfaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
UPF0181
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
AAZ90327
ShiBASE_China:
SSO3784
UniProt:
Q3YVY5
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All DBs
Position
complement(3968958..3969929)
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AA seq
323 aa
AA seq
DB search
MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIR
RWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAALVTRLAHGVKHGMDWQTAR
EPLASLFYNRKHHIAKQQHAVERTRELFAKSLGYSKPQTQGDYAIAQHFLTNLPTDAGEY
AVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLP
KMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP
GNELSQLTANAVKRFIEENVAMI
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttttgatcgttaaaacatcgtcgatgggcgatgttctccatacgttgcccgca
ctcactgatgcccagcaggcaatcccagggattaagtttgactgggtggtggaagaaggg
ttcgcacagattccttcctggcacgccgccgttgagcgagttattcctgtggcaatacgt
cgctggcgtaaagcctggttctcggcccccataaaagcggaacgcaaagcgtttcgtgaa
gcgctacaagcagagaactatgacgcagttatcgacgctcaggggctggtaaaaagcgcg
gcgctggtgacgcgtctggcgcatggcgtaaagcatggcatggactggcaaaccgctcgc
gaacctttagccagtctgttttacaatcgtaagcatcatattgcaaaacagcagcacgcc
gtagaacgcacccgcgaactgtttgccaaaagtctgggctatagcaaaccgcaaacccag
ggcgattatgctattgcacagcatttcctgacgaacctgcctacagatgctggcgaatat
gccgtatttcttcatgcgacgacccgtgatgataaacactggccggaagaacactggcga
gaattgattggtttactggctgattcaggaatacggattaaacttccgtggggcgcgccg
catgaggaagagcgggcgaaacgactggcggaaggatttgcttatgttgaagtattgccg
aagatgagtctggaaggcgttgcccgcgtgctggccggggctaaatttgtagtgtcggtg
gatacggggttaagccatttaacggcggcactggatagacccaatatcacggtttatgga
ccaaccgatccgggattaattggtggatatgggaagaatcagatggtttgtagggctccg
gggaatgagttgtctcaattgacagcaaatgctgttaagcgattcattgaagaaaacgtt
gctatgatttaa
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