Shigella sonnei Ss046: SSON_3918
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Entry
SSON_3918 CDS
T00274
Symbol
rbsD
Name
(GenBank) D-ribose high-affinity transport system
KO
K06726
D-ribose pyranase [EC:
5.4.99.62
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SSON_3918 (rbsD)
Enzymes [BR:
ssn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.62 D-ribose pyranase
SSON_3918 (rbsD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RbsD_FucU
NitrOD5
DUF4527
DUF7474
HydF_tetramer
ARC6
Motif
Other DBs
NCBI-ProteinID:
AAZ90453
ShiBASE_China:
SSO3918
UniProt:
Q3YVK9
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All DBs
Position
4139760..4140215
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AA seq
151 aa
AA seq
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MGQRNVSLMEKKMKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMALTQGV
PSFMQVLGVVTNEMQVEAAIIAEEIKQHNPQLHETLLTHLEQLQKHQGNTIEIRYTTHEQ
FKQQTAESQAVIRSGECSPYANIILCAGVTF
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
gtgggtcagcgaaacgtttcgctgatggagaaaaaaatgaaaaaaggcaccgttcttaat
tctgatatttcatcggtgatctcccgtctgggacataccgatacgctggtggtgtgtgat
gctggtttacccatccccaaaagtacaacgcgtatcgatatggcattaacccagggtgta
ccttcttttatgcaggtgctgggcgtcgtcacaaatgaaatgcaggtcgaggctgccatt
atcgcggaagagatcaaacaacataatccgcaactccacgaaacgttgctcactcacctt
gagcagctgcaaaaacaccagggaaataccattgaaattcgttacaccacgcatgaacaa
ttcaaacaacaaaccgcagaaagtcaggcggtaattcgcagcggagaatgttctccgtat
gcgaatatcattctctgtgctggcgtgacgttctga
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