Shigella sonnei Ss046: SSON_4075
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Entry
SSON_4075 CDS
T00274
Symbol
rhaS
Name
(GenBank) positive regulator for rhaBAD operon
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssn03000
]
SSON_4075 (rhaS)
Transcription factors [BR:
ssn03000
]
Prokaryotic type
Helix-turn-helix
AraC family
SSON_4075 (rhaS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
AraC_binding
HTH_AraC
Cupin_2
HTH_23
DUF4924
Motif
Other DBs
NCBI-ProteinID:
AAZ90591
ShiBASE_China:
SSO4075
UniProt:
Q3YV71
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Position
4311778..4312614
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AA seq
278 aa
AA seq
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MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHGTGIHVFNGQPYTITGG
TVCFVRAHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLLPQELDGQYPSHWRVNHSV
LQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKSSLQENLENSASRLNLLLAWL
EDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQRYLNRLRLMKARHLLRHSEASVT
DIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGFLQ
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtattacatagtgtggatttttttccgtctggtaacgcgtccgtggcgatagaa
ccccggctcccgcaggcggattttcctgaacatcatcatgattttcatgaaattgtgatt
gtcgaacatggcacgggtattcatgtgtttaatgggcagccctataccatcaccggtggc
acggtctgtttcgtacgcgctcatgatcggcatctgtatgaacataccgataatctgtgt
ctgaccaatgtgctgtatcgctcgccggatcgatttcagtttctcgccgggctgaatcag
ttgctgccacaagagctggatgggcagtatccgtctcactggcgcgttaaccacagcgta
ttgcagcaggtgcgacagctggttgcacagatggaacagcaggaaggggaaaatgattta
ccctcgaccgccagtcgcgagatcttgtttatgcaattactgctcttgctgcgtaaaagc
agtttgcaggagaacctggaaaacagcgcatcacgtctcaacttgcttctggcctggctg
gaggaccattttgccgatgaggtgaattgggatgccgtggcggatcaattttctctttca
ctgcgtacgctacatcggcagcttaagcagcaaacgggactgacgcctcagcgatacctg
aaccgcctgcgactgatgaaagcccgacatctgctacgccacagcgaggccagcgttact
gacatcgcctatcgctgtggattcagcgacagtaaccacttttcgacgctttttcgccga
gagtttaactggtcaccgcgtgatattcgccagggacgggatggctttctgcaataa
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