Shigella sonnei Ss046: SSON_4189
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Entry
SSON_4189 CDS
T00274
Symbol
iclR
Name
(GenBank) repressor of aceBA operon
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssn03000
]
SSON_4189 (iclR)
Transcription factors [BR:
ssn03000
]
Prokaryotic type
Helix-turn-helix
IclR family
SSON_4189 (iclR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_24
MarR
HTH_Crp_2
Rrf2
HTH_20
Dimerisation
DUF7343
TrmB
Motif
Other DBs
NCBI-ProteinID:
AAZ90690
ShiBASE_China:
SSO4189
UniProt:
Q3YUX2
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Position
complement(4438274..4439137)
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AA seq
287 aa
AA seq
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MKMISTIQKKETVMVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSVALT
ELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLLAIVHS
ILRNLMEESGETVNMAVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASGAGKAFLA
QLSEEQVTKLLHRKGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHALGLRCLAACI
FDEHREPFAAISISGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatttccacgatacagaaaaaggagactgtcatggtcgcacccattcccgcg
aaacgcggcagaaaacccgccgttgccaccgcaccagcgactggacaggttcagtcttta
acgcgtggcctgaaattactggagtggattgccgaatccaatggcagtgtggcactcacg
gaactggcgcaacaagccgggttacccaattccacgacccaccgcctgctaaccacgatg
caacagcagggtttcgtgcgtcaggttggcgaactgggacactgggcaatcggcgcacat
gcctttatggtcggcagcagctttctccagagccgtaatttgttagcgattgttcactct
atcctgcgcaatctaatggaagagtctggcgaaacggtcaatatggcggtgcttgatcaa
agcgatcacgaagcgattattatcgatcaggtacagtgtactcacctgatgcgtatgtcc
gcacctatcggcggtaaattgccgatgcacgcttccggtgcaggtaaagcctttttagcc
caactgagcgaagaacaggtgacgaagctgctgcaccgcaaagggttacatgcctatacc
cacgcaacgctggtgtctcctgtgcatttaaaagaagatctcgcccaaacgcgcaaacgg
ggctattcatttgacgatgaggaacatgcactggggctacgttgccttgcagcgtgtatt
ttcgatgagcaccgtgaaccgtttgccgcaatttctatttccggaccgatttcacgtatt
accgatgaccgcgtgaccgagtttggcgcgatggtgattaaagcggcgaaggaagtgacg
ctggcgtacggtggaatgcgctga
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