Shigella sonnei Ss046: SSON_4224
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Entry
SSON_4224 CDS
T00274
Symbol
dinF
Name
(GenBank) DNA-damage-inducible protein F
KO
K26937
MATE family, multidrug efflux pump
Organism
ssn
Shigella sonnei Ss046
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssn02000
]
SSON_4224 (dinF)
Transporters [BR:
ssn02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
SSON_4224 (dinF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
DUF7775
Motif
Other DBs
NCBI-ProteinID:
AAZ90722
ShiBASE_China:
SSO4224
UniProt:
Q3YUU0
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Position
4482165..4483544
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AA seq
459 aa
AA seq
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MPPGVAVCFSSLFIRLVCMAFLTSSDKALWHLALPMIFSNITVPLLGLVDTAVIGHLDSP
VYLGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQALARALVQPLLLALGAGAL
IALLRTPIIDLALHIVGGSEAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPV
ILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYATLLIGLLMVRKILKLRGISGEM
SKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTLLTFTAY
ALDGFAYAVEAHSGQAYGARDGSQLLDVWRAACRQSGIVALLFSVVYLLAGEHIIALLTS
LTQIQQLADRYLIWQVILPLVGVWCYLLDGMFIGATRAAEMRNSMAVAAAGFALTLLTLP
WLGNHGLWLALTVFLALRGLSLAAIWRRHWRNGTWFAAT
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaggcgtcgcggtttgtttttcatctctcttcatcaggcttgtctgcatggca
ttcctcacttcatctgataaagcactctggcatctcgccttacccatgattttctccaat
atcaccgttccgttgctgggactggtcgatacggcggtaattggtcatcttgatagcccg
gtttatttgggcggcgtggcggttggtgcaacggcgaccagctttctctttatgctgttg
ctgtttttacgcatgagcaccaccgggctgactgcgcaggcttatggtgccaaaaatcct
caggcattagcccgtgcgctggtgcaaccgttgctgttggcgttgggggctggggcgtta
attgcgctgctgcgtacaccgattatcgatctggctctgcatattgttggcggtagtgaa
gcagtcctggaacaggcgcggcgctttcttgaaatccgctggttaagcgcaccggcgtcg
ctggcgaatctggtattactcggttggttactcggcgtgcaatatgcccgtgcgccagta
attttgttagtggtcggcaatatcctcaacattgtgctggatgtctggctagtgatgggg
ctgcatatgaacgtgcagggcgcggctctggcgacggttattgcggaatatgcaacattg
ctgattggtctgctaatggtgcgtaaaatcctcaaactacgcggaatttccggcgaaatg
tcgaaaactgcctggcgaggaaacttccgtcgcttgctggcgcttaaccgcgatatcatg
ctgcgttcgctgttgttgcaactctgtttcggcgcgatcaccgtacttggcgcgcgactg
gggagtgacattatcgctgtaaacgcggttctgatgacgctactcacctttaccgcctat
gcgctggatggttttgcctacgcggttgaagcacattccggtcaggcatacggtgcgcgc
gacggtagccagttgctggatgtctggcgggcagcgtgccgccagtcggggatcgtagcg
ttactattttcggtggtttatttgctggcaggggaacacatcattgcgttgctgacgtcg
ttaacccagattcagcagctggctgaccgctatcttatctggcaggtgattttgccgttg
gttggcgtctggtgttatctgctggacggcatgtttataggcgcaacgcgtgccgccgaa
atgcgtaacagtatggcggtggccgccgcaggttttgcgctgacgctccttacgctgccg
tggctgggtaatcatggtttgtggctggcactaaccgtctttctggcgttgcgcgggctt
tctctggcggctatctggcggcgtcactggcgtaacggtacctggtttgccgcaacgtga
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